EY692859

Overview
NameEY692859
Unique NameEY692859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 3
Query:   84 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP---CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 413
            K V+A+++  L+    +A A+TCGQV   LAPCI+Y  + G +  P   CC+GVR+LN+AA TT DRQT C CLKQ   ++  L P+   G+P  CGV+IPY IS STDCS+V
Sbjct:    8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.101e-24
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 3
Query:  144 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 413
            ++CG V   LAPCI YLRS GP+PV CCNGV++L  +A TT DR+TAC CL  A+ SI  +N   A GLP  CGV+IPYKIS ST+C +V
Sbjct:    1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 3
Query:   81 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 416
            LKL + +++CMLVT P++++A I+CG VTGSL  C  YL  GG IP  CC+GV+ LN+ ARTT DRQ AC C++ AA ++   LN   A  LP AC V I Y IS  T+C+ VR
Sbjct:    5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.043e-23
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 3
Query:   75 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 413
            A + L++A ++ ML   P +A A+ CGQV   + PC+ Y++ GGP P   CCNGVR L+  A+++ DRQT CNCLK  A  I NLN NNA  +P  C V++PY IS   DCS++
Sbjct:    4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.778e-23
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 3
Query:   75 AALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 416
            AA +LV  A+V  ML+    +  AI+CGQV+ +L+PCI Y R +G   PV CC+GV+ L  AA++T D+Q AC C+K AAG    LN   A G+P  CGVS+PY IS S DCSK+R
Sbjct:    5 AATQLVLVAMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.033e-23
Identity = 56/115 (48.70%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   78 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 416
            +LKL   +VLC+LV  PL+  AI+  QV  SL PC+ Y+R     P P   C G+RSL +AAR   DRQ AC C+K  A  I ++N   A GLP  C V IPYKIS S DC +V+
Sbjct:    6 SLKLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.033e-23
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 3
Query:   75 AALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 416
            AA +LV  A+V  ML+    +  AI+CGQV+ +L+PCI Y R +G   PV CC+GV+ L  AA++T D+Q AC C+K AAG    LN   A G+P  CGVS+PY IS S DCSK+R
Sbjct:    5 AATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 3
Query:   84 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 413
            K+++ L++  +     +   I CG VT +LA C+ YL + GP+P  CC GV+SL   A+TTPDR+  C CLK A   I  LN +    LP  CGVSIPY IS ST+C  +
Sbjct:    6 KIITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   93 SALVLCMLVTGPL---SAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 416
            S LVL  LV   L   +  AI+CGQV+ +L+PCI Y R +G   P  CC+GV+ L  AA++T D+Q AC C+K AAG    LN   A G+P  CGVS+PY IS S DCSK+R
Sbjct:    7 SQLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY692859 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 3
Query:   75 AALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 413
            AA +LV  A+V  ML+    +  AI+CGQV+ +L+PCI Y R +G   PV CC+GV+ L  AA++T D+Q AC CLK  A SI  +N     G+P  CGVS+P+ IS+STDC+KV
Sbjct:    5 AATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117          
The following BLAST results are available for this feature:
BLAST of EY692859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP4_ORYSJ9.429e-2550.44Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]
NLTP5_VITSX2.101e-2458.89Non-specific lipid-transfer protein P5 OS=Vitis sp... [more]
NLTP5_ARATH3.583e-2451.75Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTP1_HORVU1.043e-2347.37Non-specific lipid-transfer protein 1 OS=Hordeum v... [more]
NLT42_HORVU1.778e-2350.86Non-specific lipid-transfer protein 4.2 OS=Hordeum... [more]
NLTP6_GOSHI3.033e-2348.70Non-specific lipid-transfer protein 6 OS=Gossypium... [more]
NLT43_HORVU3.033e-2350.86Non-specific lipid-transfer protein 4.3 OS=Hordeum... [more]
NLTPC_ARATH6.758e-2344.55Non-specific lipid-transfer protein 12 OS=Arabidop... [more]
NLT41_HORVU6.758e-2350.89Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLTP3_HORVU1.153e-2249.57Non-specific lipid-transfer protein 3 OS=Hordeum v... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-C01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692859 ID=EY692859; Name=EY692859; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCATAAACAAAGGCAAAAAAAAAAAAGAAAAAGAAAAAGA
AAATCTCAGGAGAAATCTCAAATGGCTGCCCTCAAGCTTGTTTCAGCTTT
GGTTCTGTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAGGCCATAACAT
GTGGGCAGGTGACTGGCTCATTGGCACCATGCATCGTTTACTTGAGATCG
GGCGGCCCTATACCTGTGCCATGCTGCAACGGCGTCAGGTCTCTCAACGC
TGCCGCCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGC
AAGCCGCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTT
CCACGAGCTTGTGGAGTCAGCATTCCTTACAAGATCAGCATCTCCACTGA
CTGCTCTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTT
AAGTTGACGGAGTAGAATAAATGTATAATAATAAGGACATTTTTGTGTCC
GAATTATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCC
TCGTTTCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGNCAGTT
TGTGTCTATTCTGGTTATTAAATGAATCTTGCCCTTGTGTCAAAAAANNA
NAANNNNNNNNNNNNNNNNNNNNNNNNNNANANAAAAAAAAAAAAAAANA
ANNAAAAAAAAAAANNNNNNNAAAAAAAGGCCGGCGCTCTAAAGATCCAA
GTTTCCTACCGTGCATGGAAGTCATAGTTCTTTTAAAGGCCCCCAAATCA
TTCCCGGCCCGCGTTTTAAACGTCGGAATGGAAAAACCTGGGTTACCAAA
TATATGCCTGGACAAATCCCCCTTTGCCGCTGGGTAAAACCAAAAGCCGC
ACGATCCCCTTCCAAAATTGGCAGCT
back to top