EY692855

Overview
NameEY692855
Unique NameEY692855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692855 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.943e-62
Identity = 115/141 (81.56%), Postives = 128/141 (90.78%), Query Frame = 1
Query:  289 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGD 711
            LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  LLGL PSVKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP++T +DSLVGQALF D
Sbjct:    1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFAD 141          
BLAST of EY692855 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.882e-57
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 1
Query:  373 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGD 711
            LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGD
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGD 113          
BLAST of EY692855 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.185e-43
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 1
Query:  430 ITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGD 711
            ITHLI CTTS VDMPGADYQLTKLLGLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGD
Sbjct:    1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGD 93          
BLAST of EY692855 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 1
Query:  532 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGD 711
            MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFGD
Sbjct:    1 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGD 60          
BLAST of EY692855 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.708e-21
Identity = 66/238 (27.73%), Postives = 117/238 (49.16%), Query Frame = 1
Query:   82 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDXXXXXXXXXXLNVGRASVYQLVSTRRRS 795
            R + +++  + VL IG + P   ++Q    D        +   E  EK KR+ ++S IK R++ + +    EN     ++    D       V VP L ++A  +A+K+WG  K  ITH++  T++G+ +P  +++L  LLGL   V+R  +   GC AG + LR A  LA+ +   R+LVVC+E+ ++ F        D +V  ++F D            +    +Y+++ +  RS
Sbjct: 2778 RLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRS 3009          
The following BLAST results are available for this feature:
BLAST of EY692855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS2_ARAHY1.943e-6281.56Putative stilbene synthase 2 (Fragment) OS=Arachis... [more]
CHS6_MEDSA1.882e-5795.58Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHS7_MEDSA1.185e-4393.62Chalcone synthase (Fragment) OS=Medicago sativa GN... [more]
CHSY_MALDO4.522e-2798.33Chalcone synthase (Fragment) OS=Malus domestica GN... [more]
PKS1_DICDI3.708e-2127.73Probable polyketide synthase 1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-B09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692855 ID=EY692855; Name=EY692855; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCTCACCAAGCACGAGCCTCAAAACATATTCATTACGGGT
TTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCG
ACGGCCCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGT
GTCAACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGA
GCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCAA
TGATTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAAT
CCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACAT
TGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCA
TCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGC
ACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACT
GCTCGGCCTGCGCCCTTCCGTCAAGCGCTTCATGATGTACCAACAAGGAT
GTTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAAC
AACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGGTCAC
TTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTT
TGTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCGATCCTGAACGTC
GGTCGAGCGTCCGTGTATCAGCTTGTGTCGACTCGCAGACGATCTCCCTG
ACTCTGNACGTGCATTGACGACACTTGCGCGAAGCNGTCTCCTTTCATTT
GCTAANGACGTCCCGGCTTGATCTCAGATATAGAGAAAGCCTGTCNNGAG
CGTCGCCCGNTGCATCACGACTGAAC
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