EY692852

Overview
NameEY692852
Unique NameEY692852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVPEL  D +     ++A+  Y+EAK  LG+E  PVL+GP++YL L K +   AK+F              E++ EL+AAGA W+Q DEP L    D  ++  F + Y   +  +  LK   +T
Sbjct:  122 YIVPELA-DAEPKVLDNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSD--AKSFEVLLDKFIPAYV--EILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVPEL  D +     ++A+  Y+EAK  LG+E  PVL+GP++YL L K +   AK+F              E++ EL+AAGA W+Q DEP L    D  ++  F + Y   +  +  LK   +T
Sbjct:  122 YIVPELA-DAEPKVLDNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSD--AKSFEVLLDKFIPAYV--EILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            ++VPE+ P  +    S K   E+ EAK LGVET PV IGP ++L L++  +  A+                EV++     GA+W+Q DEP LV+D +   ++ F   Y ++      +K L  T
Sbjct:  125 YLVPEVEPSAEIKLNSTKPFDEFNEAKSLGVETKPVFIGPYTFLKLARTPE-AAELEIDKGLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGNVKVLLNT 247          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_SHEON (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shewanella oneidensis GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            ++VPEL  D  FS A  +   E  EA+ LG +  PVL+GPVSYL L   AK V + F              E+++   A G +W+Q +EP+L ++L      A SE+Y  L+
Sbjct:  122 YLVPELKQDQVFSIAYEQFFDEVAEAQALGYKAKPVLLGPVSYLYL---AKTVGQDFDKLSLLPNLLKAYAEILARFAAQGVTWVQLEEPILALELTHEWQAAISESYQALK 230          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13
Identity = 45/115 (39.13%), Postives = 58/115 (50.43%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVA---KTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            ++VPE   D +F  +  +   E +EAK LG    PVLIGP+SYL L K  KG A   +TF              EV+  L A G  W+Q DEP+L +DL      AF  AY  L+
Sbjct:  125 YLVPEFSVDQQFQLSWTQLFEEVEEAKALGHAIKPVLIGPLSYLWLGK-LKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQ 238          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.222e-12
Identity = 44/124 (35.48%), Postives = 60/124 (48.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVP +  D +   A HK   E++EAK LG+ T PVLIGP + L L+   +G+  T               +V  +L   GA  IQ DEP LV DL + +   F   Y  L     GL+ L +T
Sbjct:  122 YIVPAIEKDTEIKLAGHKIFDEFQEAKNLGITTRPVLIGPFTLLQLTDFEEGLTAT----NFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTAEEKALFLRIYQTLLADKKGLQVLIQT 241          

HSP 2 Score: 24.2534 bits (51), Expect = 1.222e-12
Identity = 15/44 (34.09%), Postives = 23/44 (52.27%), Query Frame = 1
Query:  373 YFADVQLRHSDLTSLKVSPLWI*FGRGPDPXXIRV--IPAGSTL 498
            YF DV+  +++LTSL V  + + F  G +   +     PA  TL
Sbjct:  242 YFGDVRDIYTELTSLPVDAIGLDFVEGKETAALVATGFPADKTL 285          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.296e-12
Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            ++VPE   D +F  +  +   E  EA  LG +  PVLIGP++YL L K AKG   +F              E++  L A G  W+QFDEP+L +DL      AF  AY  L+   S LK L  T
Sbjct:  132 YLVPEFTQDQRFQLSWEQLFEEVDEAHALGHKVKPVLIGPLTYLWLGK-AKG--DSFDRLELLDRLLPVYGEILGRLAAQGVEWVQFDEPVLTLDLPQDWKTAFERAYHSLQ--YSPLKKLVAT 250          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            +IVPE   D  FS    + + +  EA   GV   PV++GPV+YL L K AK V+                  ++  L A G  W+Q DEP+LV +LD+   QAF  AYA LE
Sbjct:  129 YIVPEFHADTNFSLDPSRLLQQLAEANAQGVNAKPVILGPVTYLWLGK-AKDVSDRLALLPKLLPVYGA---LLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRTAYAALE 236          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            +IVPE   D  FS    + + +  EA   GV   PV++GPV+YL L K AK V+                  ++  L A G  W+Q DEP+LV +LD+   QAF  AYA LE
Sbjct:  129 YIVPEFHADTNFSLDPSRLLQQLAEANAQGVNAKPVILGPVTYLWLGK-AKDVSDRLALLPKLLPVYGA---LLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRTAYAALE 236          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_THIDA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12
Identity = 40/112 (35.71%), Postives = 56/112 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            +IVPE      F   + + + +  EA+  GV   PV+IGPV+YL L K   G  K                E++  L  AGA W+Q DEPLLV +L++    AF+ AY  L+
Sbjct:  131 YIVPEFAASTSFKLDASRLLAQLAEAQAAGVRAKPVIIGPVTYLALGKAKDGSDK----LGLLDRLLPVYVELLEALAGAGAEWVQIDEPLLVTELNAEWQHAFNRAYHALK 238          
The following BLAST results are available for this feature:
BLAST of EY692852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
METE_LISMF7.596e-1336.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC7.596e-1336.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI7.596e-1332.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHEON9.920e-1336.615-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU59.920e-1339.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY1.222e-1235.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM1.296e-1237.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH1.692e-1238.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA1.692e-1238.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THIDA2.210e-1235.715-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-B06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692852 ID=EY692852; Name=EY692852; organism=Citrus sinensis; type=EST; length=500bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCCGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCCAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCAAGCATTCAGTGAGGCTTATGCCGAGCTAGAGTNCACTCTGTCTG
GCTTGAAATGTCTTGNTGAGACTACTTTGCTGATGTTCAGCTGAGGCATT
CAGACCTCACTTCTTTGAAGGTGTCACCGCTATGGATTTGATTTGGTCGT
GGACCAGACCCTGNANTGATCAGAGTGATCCCTGCTGGCAGTACTCTTGC
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