EY692852

Overview
NameEY692852
Unique NameEY692852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 2.886e-12
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAY 325
            ++ P      +F     K V E+ EAK LG+ T PVL+GPVSYL L K  K  +                 E++S+L +AGA+ +Q DEP+LV+DL ++   A  +AY
Sbjct:  129 YVRPTFSKTTQFKLNGQKPVDEFLEAKELGIHTRPVLLGPVSYLFLGKADKD-SLDLEPLSLLEQLLPLYTEILSKLASAGATEVQIDEPVLVLDLPANAQAAIKKAY 235          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.770e-12
Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            +IVPEL  D  F     + +T+  EA+  G+   PV+IGPV+YL L K +    +                +++  L  AGA W+Q DEP LV DLD++   AF+ AY +L+
Sbjct:  124 YIVPELTADTHFELNPERLLTQLSEARKQGLNAKPVIIGPVTYLWLGKTSDASNR----LDLLERLLPVYSQLLEALADAGAEWVQLDEPALVTDLDANWRYAFNLAYHQLK 231          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.770e-12
Identity = 45/124 (36.29%), Postives = 59/124 (47.58%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            ++VPELGP   F         E  EA  L +   PVLIGP++YL LS   K     F               ++ +L+ +G  W+Q DEP L +DL +  L AFS AY  L    SG+K L  T
Sbjct:  120 YLVPELGPQTSFDGGVEWLFEEIDEALALNLPVKPVLIGPITYLWLS---KSHVAGFDRLSLLPKLVIRYARLLDKLRQSGIEWVQLDEPALCVDLPAEWLDAFSAAYEVL--GTSGVKVLLAT 238          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.923e-12
Identity = 42/111 (37.84%), Postives = 55/111 (49.55%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            +IVPE  P   F  AS     +  EA+ L     PVL+GP+S+L L K +KG   TF              +V+  LK  G  W+Q DEP+LV+DL      AF  AY+ L
Sbjct:  124 YIVPEFQPQQAFRLASSTLFNQVAEAQALDFPIKPVLLGPLSFLWLGK-SKG--STFDKLSLLDALLPVYGQVLHRLKTQGVEWVQIDEPILVLDLPPDWKAAFERAYSSL 231          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.923e-12
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            +IVPE     +F  AS +   E ++AK LG+    VLIGP++YL L K    V   F              E++ ++ + G  W+Q DEP+L +DL+     +F+EAY  L
Sbjct:  121 YIVPEFDDTTQFRLASDRLFQEIEDAKALGITAKAVLIGPLTYLYLGKE---VTPGFQRLDLLPRLLPVYREILQKIASLGVEWVQIDEPILSLDLEQPWRDSFAEAYHTL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE      F       V + +EAK LG+   PV++GP+++L L K  KG A  F              E+++ L A GA WIQ DEP L +DL +  ++A+   YAEL
Sbjct:  120 YLVPEFQKSTAFKANPAHYVNQIREAKALGLNFKPVIVGPLTFLWLGKE-KGEA--FNRFDLLNQLVPVYVEILNALVAEGAEWIQIDEPALALDLPAEWVEAYKSVYAEL 227          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE      F       V + +EAK LG+   PV++GP+++L L K  KG A  F              E+++ L A GA WIQ DEP L +DL +  ++A+   YAEL
Sbjct:  120 YLVPEFQKSTAFKANPAHYVNQIREAKALGLNFKPVIVGPLTFLWLGKE-KGEA--FNRFDLLNQLVPVYVEILNALVAEGAEWIQIDEPALALDLPAEWVEAYKSVYAEL 227          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L     GL+ L +T
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGV----KADDFVDSLVAAYQEVFAKLAELGATCIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11
Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE+ P   F+    K + E +EA+ L +   PV++GPV++LLLS   K V                  +++  L  AGA W+Q DEP LV D +  ++ A   AY  L
Sbjct:  121 YLVPEISPTTTFALDPSKVLRELEEARALDIPARPVVVGPVTFLLLS---KAVGSDAPLLDRLDELVPLYADLLGRLAGAGADWVQIDEPALVADRNPKEIAAAKRAYDRL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11
Identity = 46/124 (37.10%), Postives = 58/124 (46.77%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            ++VPEL  +  F         E  EA  LG+   PVLIGPV+YL LSK        F               ++ +LKA G  W+Q DEP L +DL+   L AF  AYA L    +G K L  T
Sbjct:  120 YLVPELDAETTFDGGPAWFFEEADEALALGLRARPVLIGPVTYLWLSKSH---VAGFDRLALLPQLLQGYRRILDQLKARGIEWVQIDEPALCLDLEPAWLDAFDTAYAALRE--AGPKLLLAT 238          
The following BLAST results are available for this feature:
BLAST of EY692852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
METE_YEAST2.886e-1237.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV3.770e-1235.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL3.770e-1236.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC4.923e-1237.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU4.923e-1234.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIG6.430e-1236.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE6.430e-1236.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI1.097e-1135.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR1.097e-1133.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU1.097e-1137.105-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-B06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692852 ID=EY692852; Name=EY692852; organism=Citrus sinensis; type=EST; length=500bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCCGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCCAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCAAGCATTCAGTGAGGCTTATGCCGAGCTAGAGTNCACTCTGTCTG
GCTTGAAATGTCTTGNTGAGACTACTTTGCTGATGTTCAGCTGAGGCATT
CAGACCTCACTTCTTTGAAGGTGTCACCGCTATGGATTTGATTTGGTCGT
GGACCAGACCCTGNANTGATCAGAGTGATCCCTGCTGGCAGTACTCTTGC
back to top