EY692852

Overview
NameEY692852
Unique NameEY692852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.443e-11
Identity = 40/112 (35.71%), Postives = 55/112 (49.11%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELE 337
            ++VPE   D +F  +  +   E  EA+ LG +  PVLIGP++YL L K AKG    F              ++   L   G  W+Q DEP+LV+DL      AF  AY  L+
Sbjct:  127 YLVPEFSADQQFQLSWEQLFEEVDEARALGHQVKPVLIGPLTYLWLGK-AKGA--EFDRLDLLDRLLPLYGQIFRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQ 235          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.443e-11
Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDL 289
            +IVPE+ P  KF+    K ++E KEA   G+   PV+IGP+++LLLS   KGV                  E++S L   GA W+Q DEP LV D+
Sbjct:  122 YIVPEIAPTTKFALNPDKVLSELKEALAQGIPARPVVIGPITFLLLS---KGVDGAGGPIERLEELVPIYAELLSLLADNGAQWVQLDEPALVTDM 214          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGV-AKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVP+         A HK   EY+EAK LG++T PV++GP ++L LS    GV A+ F              +V ++L   GA+ IQ DEP LV DL + +   F   Y ++     GL+ L +T
Sbjct:  122 YIVPKFEKTTAVKLAGHKIFDEYQEAKDLGLDTRPVVVGPFTFLQLSDFEDGVKAEDF-----VDSFIAAYQDVFAKLAELGATRIQLDEPALVKDLTADEKALFLNLYNKILADKKGLEVLIQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NEIMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    ++A+ + YA L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGTVE-FNRLSLLQKLLPVYVEILNALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    ++A+ + YA L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWVEAYKDVYATL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    ++A+ + YA L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_NEIM0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAEL 334
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    ++A+ + YA L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATL 228          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVPEL  D      +++A+  Y+EAK  LG+E  PVL+GP++YL L K +   A++F              E++ EL+ AG  W+Q DEP L    +  ++  F + Y   +  +  LK   +T
Sbjct:  122 YIVPELA-DANPKLLNNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSN--AESFEVLLDKFIPAYI--EILEELETAGVEWVQIDEPYLATSFEKKEIALFEKVYQSFQEAVPNLKIELQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.168e-11
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELEXTLSGLKCLXET 373
            +IVP+   + +   A HK   E+ EAK LG+ T PV++GP + L +S    GVA                 EV ++L   GA  IQ DEP LV DL + +   F + Y +L     GL+ L +T
Sbjct:  122 YIVPKFEKETQVKLAGHKIFDEFAEAKELGLVTRPVVVGPFTLLQVSDFEDGVAPA----DFVDALVVAYQEVFAKLAELGAERIQLDEPSLVKDLSAEEKALFLDLYKKLLADKKGLEVLVQT 241          
BLAST of EY692852 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.168e-11
Identity = 40/108 (37.04%), Postives = 52/108 (48.15%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAY 325
            ++VPE   D +F+ +  +   E  EA  LG    PVLIGP++YL L K  KG    F              E+   L A G  W+Q DEP+LV+DL      AF  AY
Sbjct:  130 YLVPEFSADQQFALSWEQLFEEVAEAHALGHSVKPVLIGPLTYLWLGK-EKG--SDFDRLDLLERLLPVYGEIFQRLAAQGVEWVQIDEPILVLDLPQAWKNAFERAY 234          
The following BLAST results are available for this feature:
BLAST of EY692852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
METE_PSEAE2.443e-1135.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA12.443e-1139.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD3.191e-1135.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMF3.191e-1132.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB3.191e-1132.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA3.191e-1132.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIM03.191e-1132.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW63.191e-1132.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV4.168e-1134.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY4.168e-1137.045-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-B06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692852 ID=EY692852; Name=EY692852; organism=Citrus sinensis; type=EST; length=500bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCCGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCCAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCAAGCATTCAGTGAGGCTTATGCCGAGCTAGAGTNCACTCTGTCTG
GCTTGAAATGTCTTGNTGAGACTACTTTGCTGATGTTCAGCTGAGGCATT
CAGACCTCACTTCTTTGAAGGTGTCACCGCTATGGATTTGATTTGGTCGT
GGACCAGACCCTGNANTGATCAGAGTGATCCCTGCTGGCAGTACTCTTGC
back to top