EY692851

Overview
NameEY692851
Unique NameEY692851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692851 vs. ExPASy Swiss-Prot
Match: RIBF_CORAM (Riboflavin biosynthesis protein ribF OS=Corynebacterium ammoniagenes GN=ribF PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.119e-12
Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 2 
Query:  248 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 598
            +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             +     Y   +S+G NP F + ++++E ++L + D D Y  ++ +  V ++R    F S+E L+  + +D
Sbjct:  187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKD 310
The following BLAST results are available for this feature:
BLAST of EY692851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
RIBF_CORAM7.119e-1231.25Riboflavin biosynthesis protein ribF OS=Corynebact... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-B05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692851 ID=EY692851; Name=EY692851; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCTAAAAGGCTTAATATGGAACCTTCCAGCTCTCTGGTTA
TTGAAGATTCTGTGATAGGTGTAGTGGCCGGTAAGGCTGCTGGAATGGAA
GTGGTAGCTGTACCATCACTCCCAAAGCAAACTCATCGTTACATAGCAGC
AGATGAAGTGATCAACTCTCTACTTGATTTGCGACCTGAAAAATGGGGCT
TACCCCCATTTCAAGATTGGATAGAAGGAACCCTACCATCAGAACCATGG
TATATCGGTGGTCCTGTAGTTAAGGGACTTGGCCGTGGCTCAAAGGTACT
TGGTATCCCTACAGCTAATTTGTCTACAGAGGGTTATTCAGATGTCCTTT
CAGAACATCCCTCGGGGGTCTATTTTGGTTGGGCTGGATTATCAACACGA
GGTGTTTATAAAATGGTTATGAGTATTGGCTGGAATCCATATTTCGACAA
TGCTGAAAAGACTATAGAGCCATGGTTGCTTCATGAATTTGATGAAGATT
TCTATGATGAGGAATTGCATCTTGTTATTGTTGGCTATATTCGTCCTGAG
GCTAACTTCCCATCTCTTGAGACCTTGATAGCAAAGATTCATGAGGACAG
AAAAGTTGCGGAGAGAGCACTTGATCTGCCTTTGTACTCGAAGTACAGGG
ATGACCCATATTTGAAAATCACTTCGTCAAAAGGCCAGTGAGCAGTGATG
CGGATGATCCTCTCTGGGAGCGGTTGCTCATTTGAGGCATGACCGAGTAC
TGACCATTGAGAGTGCCAGAATTTGATAACATTTTCAGAAGATCTAATGC
CAGTCCCATCAACATCCCTGGAAAAGCANNATAGTGTAATCACTCCAAGT
TCTTTATCATACTCCTATTCGAGGACTAANGAAGCATNATGGGAGTTNAT
CATGATNACTGTTTGGGGGTCCATCATCTGATAA
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