EY692827

Overview
NameEY692827
Unique NameEY692827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_CYAP8 (Protein thf1 OS=Cyanothece sp. (strain PCC 8801) GN=thf1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.653e-19
Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSK-------EGEXEGILNDIAKRP 756
            TV++TK +F   + RPI SIY   ++EL+V+ HL+     ++YDP++ALG V  + + M+GY  +ED+ +IF A   A+  D E YR +AQ L    +G + + L    +        EG     L  IAK P
Sbjct:    6 TVSDTKRDFYNHHTRPINSIYRRFIEELLVEMHLLCVNIDFRYDPIYALGVVASFQQFMQGYRPEEDKNSIFSALCQAVGGDGEKYRHEAQTLLNQVKGMSVSDLIAMGNSARTGEPGEGMLYNTLQAIAKNP 138          

HSP 2 Score: 25.7942 bits (55), Expect = 8.653e-19
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  740 TLQKDQRQGKFSYSRFFAVGL 802
            TLQ   +  +F YSR FA+GL
Sbjct:  130 TLQAIAKNPQFKYSRLFAIGL 150          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_CYAA5 (Protein thf1 OS=Cyanothece sp. (strain ATCC 51142) GN=thf1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.553e-17
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXEG 729
            TV++TK  F   + RPI SIY   ++EL+V+ HL+     ++YDP++ALG VT ++R M+GY  + D+ +IF A   A+  + E Y  +A+ L   A+G    S+ EF  K G+  G
Sbjct:    6 TVSDTKRKFYGYHTRPINSIYRRFVEELLVEMHLLSVNVDFKYDPIYALGVVTSFERFMQGYSPESDKTSIFNALCQAVDGNSEQYHQEAEALINEAKGL---SITEFKEKLGQEGG 119          

HSP 2 Score: 22.7126 bits (47), Expect = 1.553e-17
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  767 KFSYSRFFAVGL 802
            KF YSR F VGL
Sbjct:  135 KFKYSRLFGVGL 146          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNP2 (Protein thf1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=thf1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.621e-17
Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXEG 729
            TV++TK +F   + RPI SI+  V++EL+V+ HL+     ++YDP +ALG VT ++R M+GY  + D+ +IFQ+   A+  D   Y+ DA  L E A+  +   L E   ++   EG
Sbjct:    6 TVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSFERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPPEG 122          

HSP 2 Score: 22.3274 bits (46), Expect = 2.621e-17
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  770 FSYSRFFAVGLVRF 811
            F YSR FA+G+  F
Sbjct:  139 FKYSRLFAIGVYTF 152          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNP6 (Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.735e-17
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  376 PTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSL 693
            PTV+++K  F   Y RPI  +Y  V++EL+V+ HL+    ++ YDP+FALG VT +D  M  Y   E    +F A   A++++PE YR DA  + E  RG  ++++
Sbjct:    5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTI 110          

HSP 2 Score: 22.7126 bits (47), Expect = 9.735e-17
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  761 QGKFSYSRFFAVGL 802
            + +F YSR FA+GL
Sbjct:  137 RSEFKYSRLFAIGL 150          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNE7 (Protein thf1 OS=Synechococcus elongatus (strain PCC 7942) GN=thf1 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.735e-17
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  376 PTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSL 693
            PTV+++K  F   Y RPI  +Y  V++EL+V+ HL+    ++ YDP+FALG VT +D  M  Y   E    +F A   A++++PE YR DA  + E  RG  ++++
Sbjct:    5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTI 110          

HSP 2 Score: 22.7126 bits (47), Expect = 9.735e-17
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  761 QGKFSYSRFFAVGL 802
            + +F YSR FA+GL
Sbjct:  137 RSEFKYSRLFAIGL 150          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNJB (Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.090e-16
Identity = 46/95 (48.42%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEE 663
            T++ TK  F   Y RPI ++Y  V++EL+V+ HL     T+ YDP FALG VT+YD LME Y   E REAIF A   AL   PE  R +A+ L E
Sbjct:    6 TLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGLMEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLE 100          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_THEEB (Protein thf1 OS=Thermosynechococcus elongatus (strain BP-1) GN=thf1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.424e-16
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  373 PPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXE-GILNDIAKRPAAREIQLQPFLCCWAGSL 810
            P TV++TK  F   + RPI SIY   ++EL+V+ HL+R    ++Y P+FALG VT +D+ MEGY  + DR+ IF A   A + +P+  + DA   +++     +  L E  S +       LN   K      + L  FL   AG +
Sbjct:    4 PRTVSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEGYQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQGRPLSQILDELNSGQPSAPLNSLNHTGKYSRLHAVGLYAFLQELAGEV 150          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNJA (Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=thf1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.860e-16
Identity = 56/134 (41.79%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARG----QTANSLFEFPSKE--GEXEGILNDIAKRPAA 762
            T++ TK  F   Y RPI + Y  V++EL+V+ HL      + YDP FALG VT+YD LME Y   E REAIF A   AL   PE  R +A+ L E  R     Q  N L   P  E  G  + IL  + + P A
Sbjct:    6 TLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSLMEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRSGDPVQRYNLLCLKPEAEDVGGLKAILQRMTQPPYA 139          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SYNY3 (Protein thf1 OS=Synechocystis sp. (strain PCC 6803) GN=thf1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.746e-15
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKL 657
            TV++ K  F   Y RPI SIY   ++EL+V+ HL+     + YDP+FALG VT ++  M+GY   E   AIF A    + ++P+  R DA+ +
Sbjct:    6 TVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNV 98          

HSP 2 Score: 25.0238 bits (53), Expect = 1.746e-15
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  740 TLQKDQRQGKFSYSRFFAVGL 802
            TL    ++ KF YSR FA+GL
Sbjct:  128 TLTGIHQRHKFKYSRLFAIGL 148          
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_GLOVI (Protein thf1 OS=Gloeobacter violaceus GN=thf1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFE 699
            TV+++K  F   Y RP+ SIY  V+ EL+V+ HL+   + +++DP+FA G +T Y  LMEGY   E R+AI +A  TAL+   E    DA +    A    A  + E
Sbjct:    6 TVSDSKRAFFAAYPRPVNSIYRRVIDELLVEVHLLITNQDFRHDPLFATGLLTAYQALMEGYTPVEQRDAILRALCTALELSYEQLHTDAAQWRAIAAELPAQEVLE 112          
The following BLAST results are available for this feature:
BLAST of EY692827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
THF1_CYAP88.653e-1936.09Protein thf1 OS=Cyanothece sp. (strain PCC 8801) G... [more]
THF1_CYAA51.553e-1738.46Protein thf1 OS=Cyanothece sp. (strain ATCC 51142)... [more]
THF1_SYNP22.621e-1737.61Protein thf1 OS=Synechococcus sp. (strain ATCC 272... [more]
THF1_SYNP69.735e-1738.68Protein thf1 OS=Synechococcus sp. (strain ATCC 271... [more]
THF1_SYNE79.735e-1738.68Protein thf1 OS=Synechococcus elongatus (strain PC... [more]
THF1_SYNJB1.090e-1648.42Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=... [more]
THF1_THEEB1.424e-1634.69Protein thf1 OS=Thermosynechococcus elongatus (str... [more]
THF1_SYNJA1.860e-1641.79Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab... [more]
THF1_SYNY31.746e-1539.78Protein thf1 OS=Synechocystis sp. (strain PCC 6803... [more]
THF1_GLOVI1.333e-1439.25Protein thf1 OS=Gloeobacter violaceus GN=thf1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-H04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692827 ID=EY692827; Name=EY692827; organism=Citrus sinensis; type=EST; length=852bp
CCACGCCGTCCGCGCTTTTCCCGAGTGAAGGGGCANAAAAAAAAACCCAA
AAAAAAAAAAAAAAAAATTTCAGAGGGAAGAAAACCAAATGCAAANCCTA
TCCGATTCCTGTGTCTGCACTAACTAATACATTCACAAATTTAAATTTAA
TAATATAAATTACGATGGCGGTCTCTTACTTCAGTGGCGTTTACATCAAT
CGGTCAAACTTCTTGTCAGAGGAAAGTCAACGTCTCGTCAACTCGTTCCT
TAGTTTCTAATTTTGAAGGCTTTCGATTCCGTACGAGTTTGTTCTGCCAT
TGTGTCCGTTTTAGAGCTTCAAGTTCAAGTTCTCGTATGATTATTCAATG
CATGTCCACAGCTACTGATGTGCCTCCTACTGTGGCCGAGACAAAGATGA
ATTTTCTGAAGTTATATAAGAGACCAATCCCCAGTATTTACAACACCGTT
CTACAGGAATTGATTGTCCAACAACATTTGATGAGGTACAAAAGAACATA
CCAATATGACCCTGTGTTTGCCCTTGGATTTGTCACTGTATATGATCGAC
TCATGGAAGGCTATCCAAGTGATGAGGATCGAGAAGCCATCTTCCAAGCA
TACATTACGGCACTGAAGGAGGATCCAGAGCATTACAGAATTGATGCACA
AAAGTTAGAGGAATGGGCTCGGGGTCAGACTGCCAATTCATTATTTGAGT
TCCCATCTAAAGAAGGAGAAGNTGAGGGGATATTGAACGACATTGCAAAA
AGACCAGCGGCAAGGGAAATTCAGCTACAGCCGTTTCTTTGCTGTTGGGC
TGGTTCGCTTCTTTGACTGGCAATTGCACTGACCCACAGTGTTAGAAAAG
CT
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