EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +DIN+I+ I+PHR+PFLLVD++ E     SAV  KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL 76          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +DIN+I+ I+PHR+PFLLVD++ E     SAV  KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL 76          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +DIN+I+ I+PHR+PFLLVD++ E     SAV  KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL 76          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +DIN+I+ I+PHR+PFLLVD++ E     SAV  KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL 76          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CAMHC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            ++DIN+I +ILPHRFPFLL+DRVI+  P +S  A KNVT N+  F GHFP  PI P  +++  MAQ  G++
Sbjct:    1 MIDINEILEILPHRFPFLLIDRVIDLQPGISIKAYKNVTFNEQIFQGHFPGHPIYPGVMIIEGMAQAGGVL 71          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BURTA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            DI++I  +LPHR+P LLVDRV+E  P  S  A+KNVT+N+ FF GHFP+RP+MP  L++ A+AQ   L+
Sbjct:   14 DIHKILTLLPHRYPILLVDRVLELEPHKSIKALKNVTVNEPFFTGHFPKRPVMPGVLIIEALAQAAALL 82          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_AZOVD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV++ +     + A KNV+IN+ FF GHFP+ PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVDLDVEGQRIRAYKNVSINEPFFNGHFPQHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_AGRT5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fabZ PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            DI ++  +LPHR+PFLL+D++IE +   SA+ IKNVT+N+  F GHFP+RPIMP  L+V AMAQ  G +
Sbjct:   13 DILEVMKLLPHRYPFLLIDKIIEIDGDSSAIGIKNVTVNEPHFTGHFPDRPIMPGVLIVEAMAQTAGAI 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEHT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +DI +I  +LPHR+P LLVDRVI++ P  S  AIKNVTIN+  F GHFP +PI P  L++ AMAQ  GL+
Sbjct:    8 LDIQEILSLLPHRYPMLLVDRVIDFTPGKSLHAIKNVTINEPIFTGHFPNQPIFPGVLILEAMAQATGLL 77          

HSP 2 Score: 21.1718 bits (43), Expect = 3.059e-16
Identity = 8/32 (25.00%), Postives = 18/32 (56.25%), Query Frame = 1
Query:  700 SKITKPLIAGDTLXMRMTLVKLQEPFG*QIWK 795
            ++  KP++ GDT+ + +  +K +      +WK
Sbjct:   99 ARFKKPVLPGDTMHLHVEFLKERR----NLWK 126          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SINMW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Sinorhizobium medicae (strain WSM419) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            DI +I  +LPHR+PFLLVDR+IE +   SA+ IKNVT N+  F GHFPE+PIMP  L++  MAQ  G +
Sbjct:   12 DIQEILKLLPHRYPFLLVDRIIEIDSDNSAIGIKNVTANEPHFTGHFPEKPIMPGVLLIEGMAQTAGAI 80          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CLOBJ2.750e-1652.78(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBH2.750e-1652.78(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB62.750e-1652.78(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB12.750e-1652.78(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CAMHC2.750e-1653.52(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BURTA2.750e-1655.07(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AZOVD2.750e-1655.56(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AGRT52.750e-1655.07(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEHT3.059e-1657.14(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SINMW3.591e-1656.52(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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