EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOK5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=fabZ PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  440 INQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +  I++I+PHR+PFLL+DRV    P    VA KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 VQDIKNIIPHRYPFLLIDRVSYIEPGKKVVAYKNVTSNEYFFQGHFPEMPVMPGVLIIEALAQAGAVAIL 74          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOK1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium kluyveri (strain NBRC 12016) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  440 INQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +  I++I+PHR+PFLL+DRV    P    VA KNVT N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 VQDIKNIIPHRYPFLLIDRVSYIEPGKKVVAYKNVTSNEYFFQGHFPEMPVMPGVLIIEALAQAGAVAIL 74          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_AGRRK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            DI +I  +LPHR+PFL+VDR+IE +   SA+ IKNVT N+  F GHFP  PIMP  L++  MAQ  G +
Sbjct:   13 DIIEIMKLLPHRYPFLMVDRIIEIDSDNSAIGIKNVTANEPQFTGHFPGSPIMPGVLLIEGMAQTAGAI 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_EHRCJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Ehrlichia canis (strain Jake) GN=fabZ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.643e-14
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQ 628
            +I +I  ++PH +PFLL+D+VI   P  S +A+KNVT N+ FF GHFP  PIMP  L+V AMAQ
Sbjct:    4 NIQEIIKMIPHSYPFLLIDKVIACTPNESTIAVKNVTFNEPFFIGHFPGNPIMPGVLIVEAMAQ 67          

HSP 2 Score: 22.3274 bits (46), Expect = 2.643e-14
Identity = 8/20 (40.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  697 ISKITKPLIAGDTLXMRMTL 756
            ++K  KP+I GDTL + + +
Sbjct:   94 LAKFRKPVIPGDTLIIEVNV 113          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNFM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLLVDR++E       V +KNVTIN+ FF GHFP  PIMP  L++ A+AQ  G++
Sbjct:    1 MDIAKIMGYLPHRYPFLLVDRILELTSE-EIVGLKNVTINEPFFQGHFPGEPIMPGVLIIEALAQTGGVL 69          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_STRPN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP+ P+MP  +++ A+AQ  G++ L
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVVIMEALAQTAGVLEL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SPHWW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +D+ ++   LPHR+P LLVDRV E        AIK VTIN+NFF GHFP RPIMP  L+V AMAQ  G++
Sbjct:   12 LDVRRVMAALPHRYPLLLVDRVEELVVDERITAIKAVTINENFFQGHFPGRPIMPGVLIVEAMAQAAGVL 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SILST ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Silicibacter sp. (strain TM1040) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            DI  I+ ILPHR+PFLLVD+V++ +   SA  IKNVT+N+  F GHFP  PIMP   +V AMAQ  G+++
Sbjct:   13 DIGLIQQILPHRYPFLLVDKVVDIDGYQSARGIKNVTMNEPHFQGHFPGTPIMPGVTIVEAMAQTSGVML 82          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSYA2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fabZ PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 2
Query:  449 IRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            ++  LPHR+PFLLVD+++   P      IKNVTIN+ FF GHFP+ PIMP  LMV  MAQ  G++
Sbjct:    8 LKHYLPHRYPFLLVDKIVACTPGECITGIKNVTINEEFFNGHFPDEPIMPGVLMVECMAQVSGVL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PROMH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Proteus mirabilis (strain HI4320) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            + I +I D+LPHR+PFLLVDRV+++       A+KNV+ N+ FF GHFP +PI P  L++ AMAQ  G++
Sbjct:    7 LQIEEILDLLPHRYPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGIL 76          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CLOK52.574e-1450.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOK12.574e-1450.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AGRRK2.574e-1453.62(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_EHRCJ2.643e-1454.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNFM3.362e-1454.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRPN3.362e-1452.05(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SPHWW3.362e-1455.71(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SILST3.362e-1454.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSYA23.362e-1453.85(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROMH3.362e-1450.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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