EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_HAES2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Haemophilus somnus (strain 2336) GN=fabZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +++  +I  +LPHR+PFLLVDRV +Y       AIKNV++N+  F GHFP++PI+P  L++ A+AQ  G++
Sbjct:   11 IIESKEIMTLLPHRYPFLLVDRVTDYEEGKWLTAIKNVSVNEPCFTGHFPDQPILPGVLILEALAQAMGIL 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_HAES1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Haemophilus somnus (strain 129Pt) GN=fabZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +++  +I  +LPHR+PFLLVDRV +Y       AIKNV++N+  F GHFP++PI+P  L++ A+AQ  G++
Sbjct:   11 IIESKEIMTLLPHRYPFLLVDRVTDYEEGKWLTAIKNVSVNEPCFTGHFPDQPILPGVLILEALAQAMGIL 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_FRAP2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=fabZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRV-SAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFPE P+MP  L+V AMAQ   ++
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSIEDRTIVAHKNVTINEDFFNGHFPEFPVMPGVLIVEAMAQATAIL 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_OENOB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=fabZ PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.846e-13
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            M   +I+ +LPHR+P L+VDRV+E       +A KNVTIN+ FF GHFP  P+MP  L+V A+AQ   + +L
Sbjct:    1 MTATEIQKVLPHRYPMLMVDRVLELVSGERILAQKNVTINEEFFQGHFPGNPVMPGVLIVEALAQAGAIALL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_LACSS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=fabZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.846e-13
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++D  +I+ ILPHR+P LL+DRV+ + P   A+A KNV+IN+  F GHFP  P++P   ++ AMAQ   + +L
Sbjct:    1 MLDSQEIQAILPHRYPMLLIDRVLSFEPGEFAIARKNVSINEAVFQGHFPGNPVLPGVFILEAMAQTGAVALL 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_ANAPZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anaplasma phagocytophilum (strain HZ) GN=fabZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.846e-13
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQ 628
            MD  Q+   LPH +PFLLVD+V E  P    VA+KNVT N+ FF GHFP  PIMP  L+V A+AQ
Sbjct:    3 MDHKQVMRALPHSYPFLLVDKVTECIPGECIVAVKNVTFNEPFFVGHFPGNPIMPGVLIVEALAQ 67          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THET8 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=fabZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQ 628
            MDI +I  +LPHR+PFLLVDRV+E + R    A+KNVT N+  F GHFP  P+MP  L++ AMAQ
Sbjct:    1 MDIREILKVLPHRYPFLLVDRVLEADER-RFKALKNVTFNEPHFQGHFPGHPVMPGVLILEAMAQ 64          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THET2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=fabZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQ 628
            MDI +I  +LPHR+PFLLVDRV+E + R    A+KNVT N+  F GHFP  P+MP  L++ AMAQ
Sbjct:    1 MDIREILKVLPHRYPFLLVDRVLEADER-RFKALKNVTFNEPHFQGHFPGHPVMPGVLILEAMAQ 64          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THENN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=fabZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            M+I+ +R ILPHR+PFLLVD VIE +     VA KN++I+D  F GHFPE PI P  L++  +AQ  G+++L
Sbjct:    1 MNIDYVRSILPHRYPFLLVDGVIEESED-RIVAFKNISISDPVFQGHFPEYPIYPGVLIIEGLAQTAGILLL 71          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_NEIMB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Neisseria meningitidis serogroup B GN=fabZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++   I+ ++PHR+PFL +DR+  + P  +  AIKNVTIN+  F GHFP+ P+MP  L++ AMAQ  G + +
Sbjct:    7 IEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVTINEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAI 78          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_HAES22.179e-1346.48(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_HAES12.179e-1346.48(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRAP22.179e-1350.70(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_OENOB2.846e-1348.61(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LACSS2.846e-1345.21(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ANAPZ2.846e-1356.92(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THET83.717e-1356.92(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THET23.717e-1356.92(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THENN3.717e-1351.39(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_NEIMB3.717e-1344.44(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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