EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEU5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas stutzeri (strain A1501) GN=fabZ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.248e-17
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDIN+IR+ LPHR+PFLLVDRV E +     V A KNVTIN+ FF GHFP+ PIMP  L++ AMAQ  GL+
Sbjct:    1 MDINEIREYLPHRYPFLLVDRVTELDVEAKRVRAYKNVTINEPFFNGHFPQHPIMPGVLIIEAMAQAAGLL 71          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_GEOKA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Geobacillus kaustophilus GN=fabZ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.248e-17
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI+ I+PHR+PFLLVDR++E      AV IKNV+ N++FF GHFPE P+MP  L+V A+AQ   +V+L
Sbjct:    1 MLDIQQIQSIIPHRYPFLLVDRILEIEEGKRAVGIKNVSANESFFAGHFPEYPVMPGVLIVEALAQVGAVVLL 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SHESW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella sp. (strain W3-18-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLL+DRV++Y P  S  AIKNV+IN+ FF GHFP +P+MP  L++ AMAQ  GL+
Sbjct:    8 MDITEILKYLPHRYPFLLIDRVLDYTPGESLHAIKNVSINEPFFQGHFPIQPVMPGVLILEAMAQATGLL 77          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SHEPC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLL+DRV++Y P  S  AIKNV+IN+ FF GHFP +P+MP  L++ AMAQ  GL+
Sbjct:    8 MDITEILKYLPHRYPFLLIDRVLDYTPGESLHAIKNVSINEPFFQGHFPIQPVMPGVLILEAMAQATGLL 77          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SHEON ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella oneidensis GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLL+DRV+++ P  S  AIKNVTIN+ FF GHFP +P+MP  L++ AMAQ  GL+
Sbjct:    8 MDITEILKYLPHRYPFLLIDRVLDFTPGESLHAIKNVTINEPFFQGHFPIQPVMPGVLILEAMAQATGLL 77          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CHRSD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDIN+IR+ LPHR+PFLLVDRV E     + VA KNV+IN+ FF GHFP  PIMP  L++ AMAQ  G++
Sbjct:    1 MDINEIREYLPHRYPFLLVDRVTEITLGETIVAYKNVSINEPFFNGHFPHHPIMPGVLIIEAMAQACGIL 70          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_AZOSE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Azoarcus sp. (strain EbN1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDIN+I   LPHR+PFLLVDRV+E       +A+KNVT+N+ FFPGHFP  P+MP  L+V AMAQ   L+
Sbjct:    1 MDINEILQYLPHRYPFLLVDRVLEIEEGKRILALKNVTMNEPFFPGHFPHHPVMPGVLIVEAMAQAAALL 70          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_ACIBL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acidobacteria bacterium (strain Ellin345) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            V+D+  I+ ILPHR+P LL+DR+IE+  +   VAIKNVTIN+ FF GHFP  PIMP  L+V A+AQ  G ++L
Sbjct:    7 VLDVTDIQKILPHRYPLLLLDRIIEFKRKERIVAIKNVTINEQFFQGHFPGYPIMPGVLIVEAIAQAGGALLL 79          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNPX ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain WH8102) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            V+   QI  +LPHR+PF LVDRVI + P VSA  IKNVT+N+  F GHFP RP+MP  L+V AMAQ  GL++
Sbjct:   15 VLTSEQIAGLLPHRYPFALVDRVIAHEPGVSATGIKNVTVNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIV 86          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SHEPA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLL+DRV+++ P  +  AIKNVTIN+ FF GHFP +P+MP  L++ AMAQ  GL+
Sbjct:    8 MDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLL 77          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_PSEU53.248e-1761.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GEOKA3.248e-1754.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHESW4.242e-1758.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHEPC4.242e-1758.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHEON4.242e-1758.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CHRSD4.242e-1760.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AZOSE4.242e-1758.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ACIBL4.242e-1756.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNPX5.541e-1758.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHEPA5.541e-1757.14(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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