EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SHEHH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            MDI +I   LPHR+PFLL+DRV+++ P  +  AIKNVTIN+ FF GHFP +P+MP  L++ AMAQ  GL+
Sbjct:    8 MDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLL 77          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PROMP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 2
Query:  446 QIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            +I  +LPHRFPF L+DRVIE+ P   AVA+KNVTIN+  F GHFPERP+MP  L+V AMAQ  G+++
Sbjct:   16 EILGLLPHRFPFALIDRVIEHVPGKKAVALKNVTINEPQFQGHFPERPLMPGVLIVEAMAQVGGIIV 82          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_METCA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylococcus capsulatus GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLHPXXEALVK 676
            MDI  I++ LPHR+PFLLVDRV+E  P    +AIKNVT N+ FF GHFP  PIMP  L++ A+AQ  GL+      + L K
Sbjct:    1 MDIQAIKEFLPHRYPFLLVDRVLECEPGKRLLAIKNVTYNEPFFQGHFPRVPIMPGVLIIEALAQTTGLLASETAPDVLGK 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_JANMA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Janthinobacterium sp. (strain Marseille) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +DINQI+  LPHR+P LLVDRV+ +    S  AIKNVT+N+ FF GHFP +P+MP  LM+ A+AQ   L+
Sbjct:    4 LDINQIKQYLPHRYPLLLVDRVLNWESGKSITAIKNVTVNEEFFNGHFPHKPVMPGVLMIEALAQTAALL 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_GEOTN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI+ I+PHR+PFLLVDR++E      AV IKNV+ N++FF GHFPE P+MP  L+V A+AQ   +V+L
Sbjct:    1 MLDIQQIQAIIPHRYPFLLVDRILEIEEGKRAVGIKNVSANESFFAGHFPEYPVMPGVLIVEALAQVGAVVLL 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BACCZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus cereus (strain ZK / E33L) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI++I+PHR+PFLLVD+V+E      A+ IKNVT N+ FF GHFP+ P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAML 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BACC0 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus cereus (strain AH820) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI++I+PHR+PFLLVD+V+E      A+ IKNVT N+ FF GHFP+ P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAML 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BACAN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI++I+PHR+PFLLVD+V+E      A+ IKNVT N+ FF GHFP+ P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAML 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BACAC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI++I+PHR+PFLLVD+V+E      A+ IKNVT N+ FF GHFP+ P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAML 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_BACAA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis (strain A0248) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI++I+PHR+PFLLVD+V+E      A+ IKNVT N+ FF GHFP+ P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAML 73          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_SHEHH5.541e-1757.14(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROMP5.541e-1761.19(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_METCA5.541e-1753.09(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_JANMA5.541e-1755.71(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GEOTN5.541e-1754.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACCZ5.541e-1753.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACC05.541e-1753.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAN5.541e-1753.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAC5.541e-1753.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAA5.541e-1753.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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