EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_ANOFW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DI QI+ I+PHR+PFLLVDR++E      AV IKNV+ N+ FF GHFPE P+MP  L+V A+AQ   + ML
Sbjct:    1 MLDIQQIQQIIPHRYPFLLVDRIVEVEEGKRAVGIKNVSANEQFFVGHFPEYPVMPGVLIVEALAQVGAVAML 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEAE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa GN=fabZ PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV+E +     + A KNV+IN+ FF GHFPE PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEAB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV+E +     + A KNV+IN+ FF GHFPE PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEA8 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain LESB58) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV+E +     + A KNV+IN+ FF GHFPE PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEA7 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain PA7) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV+E +     + A KNV+IN+ FF GHFPE PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_OCHA4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 2
Query:  437 DINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            DI  +  +LPHR+PFLL+DR+++ +  VSA  IKNVTIN+  F GHFPE+PIMP  L+V AMAQ  G + L
Sbjct:   13 DIQDLLAVLPHRYPFLLIDRIVDIDGDVSATGIKNVTINEPHFTGHFPEKPIMPGVLIVEAMAQTAGAISL 83          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_DESRM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfotomaculum reducens (strain MI-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            ++DIN I+ ILPHR+PFLLVDR++E       V IKNVT N+ FFPGHFP  P+MP  L++ AMAQ   + +L
Sbjct:    1 MLDINAIQQILPHRYPFLLVDRILEMEEGKRVVGIKNVTANEPFFPGHFPGYPVMPGVLVIEAMAQVGAVAIL 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_AZOSB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Azoarcus sp. (strain BH72) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQ 628
            MDIN+I   LPHR+PFLLVDRV+E       +A+KNVT+N+ FFPGHFP  P+MP  L+V AMAQ
Sbjct:    1 MDINEIVQYLPHRYPFLLVDRVLELEENKRILALKNVTMNEPFFPGHFPHHPVMPGVLIVEAMAQ 65          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_ACISJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acidovorax sp. (strain JS42) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLHPXXEA 667
            MDI+QI  +LPHR+PFLLVDRV E       +AIKNVTIN+ FF GHFP RP+MP  L++ A+AQ  GL+      EA
Sbjct:    1 MDIHQILKLLPHRYPFLLVDRVNELERGKRILAIKNVTINEPFFTGHFPARPVMPGVLILEALAQAAGLLSFDMMGEA 78          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THEP3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLH 652
            M+   IR ILPHR+PFLLVDR+IE      AV IKNVT N+ FF GHFP+ PIMP  L+V A+AQ  G+ +++
Sbjct:    1 MENKDIRKILPHRYPFLLVDRIIEIEEGKKAVGIKNVTANEPFFQGHFPDNPIMPGVLIVEALAQVAGIAVMN 73          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_ANOFW5.541e-1754.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEAE7.237e-1758.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEAB7.237e-1758.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEA87.237e-1758.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEA77.237e-1758.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_OCHA47.237e-1756.34(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESRM7.237e-1754.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AZOSB7.237e-1761.54(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ACISJ7.237e-1756.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THEP39.451e-1756.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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