EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_RICAE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia africae (strain ESF-5) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MP  LMV AMAQ   +++
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVEAMAQLAAVLV 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEMY ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas mendocina (strain ymp) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV++ +     + A KNV+IN+ FF GHFPE PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVDLDVEGKQIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PSEFS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas fluorescens (strain SBW25) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MDIN+IR+ LPHR+PFLLVDRV++ N     + A KNV+IN+ FF GHFP  PIMP  L++ AMAQ  G++
Sbjct:    1 MMDINEIREYLPHRYPFLLVDRVVDLNVEEKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGIL 72          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PROM5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 2
Query:  446 QIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            +I  +LPHRFPF LVDRVIE+ P   AVA+KNVTIN+  F GHFPERP+MP  L+V +MAQ  G+++
Sbjct:   16 EILGLLPHRFPFALVDRVIEHIPGHKAVALKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIV 82          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Okra / Type B1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            +DIN+I+ I+PHR+PFLLVD++ E     SAV  KNVT+N+ FF GHFPE P+MP  L++ A+AQ   + +L
Sbjct:    5 LDINEIKRIIPHRYPFLLVDKITELEEGKSAVGYKNVTVNEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL 76          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THETN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermoanaerobacter tengcongensis GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLH 652
            M+   IR ILPHR+PFLLVDR+IE      AV IKNVT N+ FF GHFP+ PIMP  L+V A+AQ  G+ +++
Sbjct:    1 MENKDIRKILPHRYPFLLVDRIIELEEGKRAVGIKNVTSNEPFFQGHFPDNPIMPGVLIVEALAQVAGIAVMN 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THEPX ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermoanaerobacter sp. (strain X514) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLH 652
            M+   IR ILPHR+PFLLVDR+IE      AV IKNVT N+ FF GHFP+ PIMP  L+V A+AQ  G+ +++
Sbjct:    1 MENKGIRKILPHRYPFLLVDRIIEIEEGKKAVGIKNVTANEPFFQGHFPDNPIMPGVLIVEALAQVAGIAVMN 73          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNS3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain CC9311) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            V++  QI  +LPHR+PF LVDRV+E+ P   AVA+KNVT N+  F GHFP RP+MP  L+V AMAQ  GL++
Sbjct:   13 VLNAEQIMGLLPHRYPFALVDRVLEHVPGERAVALKNVTFNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIV 84          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PROM2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9215) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 2
Query:  446 QIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            QI  +LPHR+PF LVD+VIE+ P   AVAIKNVTIN+  F GHFPERP+MP  L+V +MAQ  G+++
Sbjct:   16 QILGLLPHRYPFALVDKVIEHIPGERAVAIKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIV 82          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_PARUW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Protochlamydia amoebophila (strain UWE25) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  425 PTVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAV-AIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            P  +DINQI +ILPHR+PFLLVDRV+E +     + A KNVTIN++FF GHFP  PIMP  L++ A+AQ  G+++
Sbjct:    8 PQALDINQIINILPHRYPFLLVDRVLEIDVEKGYILAQKNVTINESFFQGHFPNAPIMPGVLILEALAQAGGILV 82          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_RICAE1.234e-1654.17(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEMY1.234e-1656.94(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PSEFS1.234e-1656.94(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROM51.234e-1661.19(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBK1.234e-1652.78(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THETN1.612e-1656.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THEPX1.612e-1656.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNS31.612e-1656.94(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROM21.612e-1661.19(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PARUW1.612e-1656.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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