EY692811

Overview
NameEY692811
Unique NameEY692811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 8.157e-56
Identity = 108/223 (48.43%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   33 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEI 701
            V+E   V+++ IGGL+   +ELQE V+ P+  PE+F + G+ P KGVL YG PG GKTLLAKA+A+   A FI V G EL+  + G+    VREIF+ AR+ AP ++F DELDSIA +R++    A     R L QLL EMDG   +K + II ATNRPD++DPA+LRPGR D+L+++P+P  E+R +I K    K  ++ D+D + LAK T+G SGA +  I
Sbjct:  150 VIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAI 372          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.391e-55
Identity = 104/214 (48.60%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   51 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXI 692
            + W+DIGGL++V+  L+ET+++P ++P+ F+   +    G+L YGP GCGKTLLA AIA EC  NFISVKGPELL  + G SE  VR++F +A  + PCVLFFDE DSIA +R     D  G  DRV+NQ LT++DG+     V+++ AT+RPD+IDPALLRPGRLD+ +Y  +P+   RL I      K  +S  + L  L+  TQ ++GA +
Sbjct:  863 IKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGH---DNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADL 1073          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.391e-55
Identity = 102/229 (44.54%), Postives = 154/229 (67.25%), Query Frame = 3
Query:   24 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR-VSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEICQ 707
            R   VE+P V W+D+GGL+++K++LQ+ V++P++H   F K G+SP +G+L +GPPGC KT LAKA AN  QA+F S+   EL +M+ GE EA +R  F +AR ++P ++FFDE D +A +R   S  ++    +R+L+ LLTEMDG+   K + ++ ATNRP  ID AL+RPGR D ++Y+P PD E+R +I +       +  DVDLR +A+ T  F+GA +  +C+
Sbjct:  274 RGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCR 502          

HSP 2 Score: 136.732 bits (343), Expect = 1.830e-31
Identity = 84/231 (36.36%), Postives = 123/231 (53.25%), Query Frame = 3
Query:   48 NVNWE---DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQRVSSVGDAGGAAD-RVLNQLLTEMDG---MSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEICQ 707
            N  W    +IGG E   + L+E + +P  +P +    G+   +G+L YGPPG GKT L +A+  EC A+ I +    +     GESE  +RE F +A   A    P V+F DE+D +  +R     DA    D R+ +QL T MD     S+   V ++ +TNR D IDPAL R GR D L+ +  P+EE RL+I +    K  +   VDL+A+A    G+ GA +  +C+
Sbjct:   15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-----DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCR 240          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.019e-55
Identity = 106/227 (46.70%), Postives = 152/227 (66.96%), Query Frame = 3
Query:   15 SALRETVVEVP-NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXI 692
            ++LR   +  P ++ W+ IGGL  V++ L +T+Q P ++PE F    +    G+L YGPPG GKTLLA  +A E   NFIS+KGPELL+ + G SE  VR++F +A+ + PC+LFFDE +SIA +R     D  G  DRV+NQLLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I         ++ DVDL+ +A  T  F+GA +
Sbjct:  825 ASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGH---DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADL 1048          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.624e-54
Identity = 112/240 (46.67%), Postives = 152/240 (63.33%), Query Frame = 3
Query:   15 SALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL---------XKSPVSKDVDLRALAKYTQGFSGAXITEIC 704
            SALR   + +  N+ W DIG L N K  L ET+++P ++   F    +    G+L YG PGCGKTLLA A+A +C  NFISVKGPE+L  + G SE N+RE+F++A+   PC+LFFDE DSIA +R     D+ G  DRV+NQLLT+MDG      V+I+ AT+RPD+ID ALLRPGRLD+ +   +P E  RL I +A +          K  + K+ DL+ +A+ T GFSGA +  +C
Sbjct:  681 SALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLC 917          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.624e-54
Identity = 105/225 (46.67%), Postives = 150/225 (66.67%), Query Frame = 3
Query:   18 ALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXI 692
            +LR   ++  +V W+DIGGL + K  L ET+++P ++   F    +    G+L YG PGCGKTLLA A+A +C  NFIS+KGPE+L  + G SE +VRE+F++A+ + PC+LFFDE DSIA +R     D+ G  DRV+NQ+LT+MDG      V+++ AT+RPD+ID ALLRPGRLD+ +   +PD + RL I ++      VSK V+L ++A    GFSGA +
Sbjct:  785 SLRGVKLQKSDVRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADL 1006          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.427e-54
Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 3
Query:   33 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEIC 704
            +V+ P   +EDIGGLE    E++E V+ P+  P+ FEK G++P KGVL YGPPG GKTLLAKA+A+E  A F+   G EL+  + GE    VRE+FD A++ AP ++F DE+D+I   R  ++        R L QLL  MDG   +  V IIGATNR DI+D ALLRPGR D++I IPLPD E R  I K       +S+DVDL  +A+ T+G +GA +  IC
Sbjct:  144 LVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAIC 367          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.476e-54
Identity = 105/224 (46.88%), Postives = 144/224 (64.29%), Query Frame = 3
Query:   33 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEIC 704
            ++E PNV + +IGGLE   REL+E V+ P+++PE F + G+ P KGVL YGPPG GKT+LAKA+A E  A FI V   E    + GE    VRE+F+ A++ AP ++F DE+D+I  +R+           R L QLL E+DG      V II ATNR DI+DPALLRPGR D++I +PLPD + R +IF   L K  +  +++L  L++ T+GFSGA I  +C
Sbjct:  125 IIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVC 348          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.701e-53
Identity = 107/224 (47.77%), Postives = 141/224 (62.95%), Query Frame = 3
Query:   33 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEIC 704
            V+E PNV++ DIGGL     E++E ++ P+++PE F++ G+ P KGVL YGPPG GKTLLAKA+A E  A FI V   E    + GE    VRE+F+ AR+ AP ++F DE+D+I  +RV           R L QLL E+DG      V II ATNR DI+DPALLRPGR D+LI +PLP+ E R +IF+  L K     ++    LA  T+GFSGA I  +C
Sbjct:  125 VIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVC 348          
BLAST of EY692811 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.701e-53
Identity = 104/224 (46.43%), Postives = 145/224 (64.73%), Query Frame = 3
Query:   33 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRVS-SVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLXKSPVSKDVDLRALAKYTQGFSGAXITEI 701
            + E P V ++D+ G+E VK E++E ++Y ++ P KF+K G  P KGVL YG PG GKTLLAKAIA E    FISV G + + M+ G   A VR++F+ A++ APC++F DE+D++   R +  VG      ++ LNQLL EMDG      + +I ATNRPDI+DPALLRPGR D+ I+IP PD   R +I K       ++KDVDL  +A+ T GF+GA +  +
Sbjct:  146 IEEKPKVTFKDVAGIEEVKEEVKEIIEY-LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENL 368          
The following BLAST results are available for this feature:
BLAST of EY692811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 388
Match NameE-valueIdentityDescription
PSMR_METAC8.157e-5648.43Proteasome-activating nucleotidase OS=Methanosarci... [more]
PEX1_DICDI1.391e-5548.60Peroxisome biogenesis factor 1 OS=Dictyostelium di... [more]
CD48B_ARATH1.391e-5544.54Cell division control protein 48 homolog B OS=Arab... [more]
PEX1_MOUSE9.019e-5546.70Peroxisome biogenesis factor 1 OS=Mus musculus GN=... [more]
PEX1_YEAST2.624e-5446.67Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisia... [more]
PEX1_PICPA2.624e-5446.67Peroxisome biosynthesis protein PAS1 OS=Pichia pas... [more]
PSMR_METHJ3.427e-5448.21Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_SULSO4.476e-5446.88Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_SULTO1.701e-5347.77Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
FTSH_AQUAE1.701e-5346.43Cell division protease ftsH homolog OS=Aquifex aeo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-F10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692811 ID=EY692811; Name=EY692811; organism=Citrus sinensis; type=EST; length=944bp
CCCACGCGTCCGCATCTGCTCTGCGTGAAACTGTTGTTGAAGTTCCCAAT
GTCAACTGGGAGGATATCGGTGGCCTTGAGAATGTTAAGAGAGAGCTTCA
AGAGACTGTTCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTG
GCATGTCCCCATCAAAGGGAGTGCTTTTCTATGGTCCTCCTGGATGTGGG
AAAACCCTTCTGGCCAAAGCTATTGCCAATGAGTGTCAGGCAAATTTCAT
TAGTGTCAAGGGTCCTGAGTTGCTTACAATGTGGTTTGGAGAGAGTGAAG
CCAATGTACGAGAAATTTTCGACAAGGCCCGTCAATCAGCTCCCTGCGTT
CTATTTTTTGATGAACTTGATTCGATTGCTACCCAGAGAGTAAGCAGTGT
TGGAGATGCTGGAGGTGCTGCTGATAGGGTTTTGAACCAGCTTCTGACAG
AGATGGATGGCATGTCCGCAAAGAAAACTGTCTTCATTATTGGAGCCACC
AACCGACCAGATATCATAGATCCTGCCCTTCTCCGTCCAGGCCGTCTTGA
CCAGTTGATTTATATCCCTCTCCCTGATGAGGAATCTCGCCTTCAAATTT
TCAAGGCTTGCTTGANGAAATCACCGGTGTCCAAAGATGTTGACCTCAGA
GCTCTTGCTAAGTACACCCAAGGCTTTAGTGGTGCANATATTACTGAAAT
ATGCCAGCGGGGCTTGCAAATATGCCATCCGAGAGAATATCGAGAAAGAT
ATTGAGAGGGAGAGGAGGAGAAGTGAGAACCCANAGGCATGGGAGGAGGA
TGTNNAGGATGAAATGGCTGAAATTAAAGCTGTGCATTTCNAAGGATCAA
TGAAAATTGCTCTTTAAATTGTTAGTGATGCTTACATACCCAATATCCAA
GCATTTGTCTAACATGGGAACANCAAAAAGGTTTGGGAAGGGAA
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