EY692792

Overview
NameEY692792
Unique NameEY692792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_SCHPO (Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe GN=vps29 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.637e-44
Identity = 84/184 (45.65%), Postives = 127/184 (69.02%), Query Frame = 3
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGA--FSSITYD--VNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 542
            LVL +GD HIP RA  L  KF+ +L+PGKI  I+C GNL    V++YLK +C DL +++G +D  ++ P    +T+G FK+G  +GH V+P    ++L++L R++D DIL+ G TH+F AY+ +G   +NPGSATGA   S++  D  + PSFVLMD+ G  +++YVY + DGEV+V+K+ ++K
Sbjct:    2 LVLVIGDFHIPDRAPKLSEKFRQLLIPGKISQIICLGNLTSTSVYEYLKHVCSDLKLVKGAFDISSKAPIAGKITLGSFKIGYTNGHLVVPQDSPEALSILAREMDADILLFGGTHKFAAYELDGCFFVNPGSATGAPNVSAVEDDEKIVPSFVLMDVQGAVLILYVYRIFDGEVRVEKMQYRK 185          
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: PEP11_YEAST (Vacuolar protein sorting-associated protein 29 OS=Saccharomyces cerevisiae GN=VPS29 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.539e-23
Identity = 72/173 (41.62%), Postives = 92/173 (53.18%), Query Frame = 3
Query:    3 LVLSLGDLHIPHRAADLPAKFKSML-VPGKIQHIVCTGNLCIKEVHDYLKI---ICPDLHIIRGEYDEETRYPETKT------------------LTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSS---ITYDVNPS 446
            L+L+L D HIP RA DLP KFK +L VP KI  +   GN    + +D+LK    I  ++ I+RGE+D     P TK                   +  G  K+G C G+ V+P  D  SL  L RQLDVDIL+ G TH   AY  EG   +NPGS TGAF++   I +DV  S
Sbjct:    2 LLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNITIVRGEFDNG-HLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171          
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: Y1774_METTH (Putative metallophosphoesterase MTH_1774 OS=Methanobacterium thermoautotrophicum GN=MTH_1774 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 50/159 (31.45%), Postives = 84/159 (52.83%), Query Frame = 3
Query:    3 LVLSLGDLHIPHRAADLP-AKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEE--TRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDG 470
            L+  + D HIP RA+++P A F +      ++ I+  G+L   ++   L+ + P +  ++G  D       P ++   I  F++GL HG +V P GD   L  L  +L  D+L++GHTHQ    + E  V++NPGS T     +    +PS +++ IDG
Sbjct:    2 LIGVISDTHIPDRASEIPEAVFDAFR---DVELILHAGDLTSPDILTELETLAP-VECVQGNMDRHYGIETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVLLNPGSPT-----VPRLTDPSVMVLRIDG 150          
The following BLAST results are available for this feature:
BLAST of EY692792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VPS29_SCHPO3.637e-4445.65Vacuolar protein sorting-associated protein 29 OS=... [more]
PEP11_YEAST3.539e-2341.62Vacuolar protein sorting-associated protein 29 OS=... [more]
Y1774_METTH3.671e-1231.45Putative metallophosphoesterase MTH_1774 OS=Methan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-E03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692792 ID=EY692792; Name=EY692792; organism=Citrus sinensis; type=EST; length=733bp
TGTTGGTCTTATCGTTGGGCGATTTGCACATACCACATAGAGCAGCTGAT
TTGCCTGCCAAGTTTAAGTCCATGCTTGTTCCTGGCAAGATCCAACACAT
CGTTTGCACCGGCAATCTCTGCATCAAAGAAGTTCATGACTACCTAAAGA
TTATTTGTCCTGACTTGCATATTATTCGTGGTGAATATGATGAAGAGACA
CGATATCCTGAGACCAAAACGCTAACTATTGGTCAATTCAAACTAGGACT
GTGCCATGGTCATCAGGTTATTCCGTGGGGGGACCTAGACTCACTAGCCA
TGTTACAGAGGCAGCTGGATGTAGACATACTTGTGACTGGTCACACTCAT
CAGTTTACTGCTTATAAACACGAGGGAGGTGTGGTTATAAACCCAGGTTC
TGCCACCGGTGCTTTCAGCAGCATCACCTACGATGTTAATCCAAGTTTCG
TCCTCATGGATATCGATGGCCTGCGGGTTGTGGTCTATGTTTATGAACTC
ATTGATGGGGAGGTTAAAGTTGACAAGATTGATTTTAAGAAAACCAGCAC
ATGTCACTCTGCTCATTAAGAACAATGCTCAGATTTCAATTTTGTTGAAC
TGANCTCTCGATTCACCATATATGCGTGAGTCTGCAATACATGTGATTCC
ATTCTCTGTATGTGATTGGAAGATTTTGGTTTGTTTAAACTTAAGAAACA
ATNCTACGACCCTTTTTACCAAAAAAAAAAAAA
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