EY692789

Overview
NameEY692789
Unique NameEY692789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.232e-54
Identity = 107/190 (56.32%), Postives = 135/190 (71.05%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.095e-53
Identity = 104/191 (54.45%), Postives = 135/191 (70.68%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTIL 644
            M+TI S++ + IP  +K  + A+V+ + G RG L R FKHL LD ++       KR LK++ WFG++K  AA+RT  SH+ N+I GVT G++YKMR VYAHFPIN     NN  IEIRNFLGEK +R+V+M  GVTV+ S   KDEL+++GNDIE VS SAALI     VKNKDI K LDG+YVSEK+T++
Sbjct:    1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.736e-53
Identity = 104/194 (53.61%), Postives = 139/194 (71.65%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653
            MK I++++ + IP+G+ V + ++++ V+GPRG L R+FKHL +D  ++       R LK++ WFGS+K  AA+RT  SHV N+I GVTKG++YKMR VYAHFPIN      N  IEIRNFLGEK +R+V M  GVTV+ S K KDEL+++GN +E VS SAALI     VKNKDI K LDG+YVSEK+T+  +E
Sbjct:    1 MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVEVDE 189          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.150e-51
Identity = 96/190 (50.53%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MK I SS  + IP+ V V +  + ++V GPRG LS+ F H ++D +L+     GK++L +D WFG+RK  A I+T  S + N+ITGVTKGY YKMRFVYAHFPIN ++ +  + +EIRNF GEK VR++++LDG+T  R++K KDE+VL GN +EL+S+S A I  +  +K KD+ K LDGIYVSE++ +
Sbjct:    1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 185          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.397e-49
Identity = 97/191 (50.79%), Postives = 133/191 (69.63%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTIL 644
            MK I S++T+  P+GV   +  +++ V GPRG + +DF+HL+++      E  GK  L++  WFG RK  AAIRT  SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNFLGEK VR+V + +GV    S   KDE+V++GND++ VS++AA I     VK KDI K LDGIYVSEK+TI+
Sbjct:    1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEM-----ERIGKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIV 186          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.526e-46
Identity = 96/193 (49.74%), Postives = 134/193 (69.43%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTIL 644
            MK I + + ++IP+GV V I +++++V GPRG L+++ KH+++ F      +   + +K+    G RK  AA+RT  S V N+ITGVTKGY+YKMR+VYAHFPIN +I   +  K IE+RNFLG+KK+R V + DGVT+  S  VKDE+VL GN +E VS++AA +   C V+NKDI K LDGIYVS K  I+
Sbjct:    1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIV 188          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.426e-46
Identity = 95/192 (49.48%), Postives = 133/192 (69.27%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MK I + + +++P+GV V I +++++V GPRG L+++ KH+++ F      +   + +K+    G RK  AA+RT  S V N+ITGVTKGY+YKMR+VYAHFPIN +I   +  K IE+RNFLG+KK+R V + DGVT+  S  VKDE+VL GN +E VS++AA +   C V+NKDI K LDGIYVS K  I
Sbjct:    1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFI 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.582e-45
Identity = 92/189 (48.68%), Postives = 127/189 (67.20%), Query Frame = 3
Query:   75 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            + I   ET+ IP+GV V I A+++ V+GPRG L ++ + ++++     +       +K   W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++  N   +EIRNFLGE+  R +  L GVTV  S  VKDE++++GN +E VS+SAA I   C+V+NKDI K LDGIYVSE+  I
Sbjct:    3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKKQGNT------IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.322e-44
Identity = 92/189 (48.68%), Postives = 124/189 (65.61%), Query Frame = 3
Query:   75 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            + I   ET+ IP GV V I A+ + V GPRG L ++ +H++++     +       +K   W GSRK +A IR+  S + N+I GVT+G+RYKMR VYAHFPIN ++  N   +EIRNFLGE+  R +  L GVTV  S  VKDE++L+GN +E VS+SAA I   C+V+NKDI K LDGIYVSE+  I
Sbjct:    3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNT------IKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_HAECO (60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.845e-34
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDM 464
            MK + S++T+D PDGV   +  +V+ V GPRG L RDF+HL+++      E  GK +L++  WFG RK  AAIRT  SH+ N+I GVTKG+RYKMR VYAHFPIN ++ +  + +EIRNFLGEK VR V +
Sbjct:    1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEM-----ERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126          
The following BLAST results are available for this feature:
BLAST of EY692789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL9_PONAB3.232e-5456.3260S ribosomal protein L9 OS=Pongo abelii GN=RPL9 P... [more]
RL9_DROME2.095e-5354.4560S ribosomal protein L9 OS=Drosophila melanogaste... [more]
RL9_SPOFR2.736e-5353.6160S ribosomal protein L9 OS=Spodoptera frugiperda ... [more]
RL9_DICDI1.150e-5150.5360S ribosomal protein L9 OS=Dictyostelium discoide... [more]
RL9_CAEEL2.397e-4950.7960S ribosomal protein L9 OS=Caenorhabditis elegans... [more]
RL9B_YEAST5.526e-4649.7460S ribosomal protein L9-B OS=Saccharomyces cerevi... [more]
RL9A_YEAST9.426e-4649.4860S ribosomal protein L9-A OS=Saccharomyces cerevi... [more]
RL9B_SCHPO3.582e-4548.6860S ribosomal protein L9-B OS=Schizosaccharomyces ... [more]
RL9A_SCHPO2.322e-4448.6860S ribosomal protein L9-A OS=Schizosaccharomyces ... [more]
RL9_HAECO2.845e-3452.6760S ribosomal protein L9 (Fragment) OS=Haemonchus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692789 ID=EY692789; Name=EY692789; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGGGCAGCTCTATCTTAAGCGTAGGAGGAGAAGAAGAAGGA
AGATATTACAGAGAGAGGAAAATGAAGACAATTCTCTCTTCAGAGACTAT
GGACATCCCAGATGGGGTGAAAGTCAAGATAAATGCAAAGGTTATTGAAG
TAGAGGGACCGAGAGGTAAGCTCAGCCGCGACTTCAAGCATTTGAACCTC
GACTTCCATCTCATGACTGACGAGGAAACCGGTAAGCGCAAGCTTAAGAT
CGATGCCTGGTTCGGCTCTCGCAAGACCAGCGCCGCCATCAGAACTGCCC
TCAGCCATGTCGGCAATCTCATCACTGGTGTTACCAAGGGCTATCGCTAC
AAGATGAGATTTGTGTACGCTCACTTTCCCATCAACGCCTCCATCGGTAA
CAATAACAAGGCCATTGAGATCCGTAACTTTCTTGGAGAGAAAAAGGTTC
GAAAAGTGGATATGCTTGATGGTGTTACCGTCATTAGGTCCGATAAGGTT
AAGGATGAACTCGTTCTTGATGGAAATGACATTGAACTCGTGTCTCGCTC
TGCTGCTCTAATCAATCANAAATGCCATGTGAAGAACAAGGACATTANGA
AAGTTCTTGATGGGATCTATGTCAGTGAGAAAAGCACCATACTTGGAGAA
GAATGATGATTAGCTCTCGAATTTTCTTGTCATAGTAATGTTATGAATTA
TTTTTTAAATCTTTTTAATTTTGCCTCTTACTTTGAGTNGACGACATGCT
TTTGGTTGTATTTGGGGATTGGGACCTGGGGAGTCTANATTTCAATTTAT
GTCTTCAATTGCTTCATCACATATATGTATGGATTTATAGCTATGCATCT
GCATTTTTGATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCG
GCCCT
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