EY692789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.845e-34 Identity = 77/187 (41.18%), Postives = 121/187 (64.71%), Query Frame = 3 Query: 75 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKV-KDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 K + +E + +P+GV+V I+ + V+GP+G+L+RDF H + ++E GK K+ ++A+F +R+ A + T +H+ N+ITGVTKG+RYK++ VY+HFP+ + + IE NFLGEK R ++ GVTV KV KD+++++G DIE V ++AA I VK+KD +DGIY+ EK Sbjct: 3 KAVYVAEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGK-KVVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIE--NFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEK 182
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32 Identity = 70/184 (38.04%), Postives = 115/184 (62.50%), Query Frame = 3 Query: 75 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKD-ELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYV 623 K + +D+P+GV+V++ ++V GP+G+L RDF H + EE GK+++ ++ +F +RK A + T +H+ N+ITGVTKG+RYKM+ V++HFPI+ + + +EI NF+GEK R +L GVTV KV+ +++++G DIE V+++AA I + D +DGIY+ Sbjct: 3 KAVWVHALVDVPEGVEVEVEGSKVKVRGPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKVVGDR--VEIHNFIGEKAPRVAKVLPGVTV----KVQGRDVIIEGTDIEKVAQTAANIEQATKITEFDRRVFMDGIYI 179
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.700e-29 Identity = 67/182 (36.81%), Postives = 108/182 (59.34%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-----DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYV 623 E +DIP+ V V+IN ++V GP+G + RDF H+ +++ +E K + ++ +F R+ A + T SH+ N+I GV KGYRYK++ +Y+HFPI + + N+ + I+NFLGEK D + I + VK ++++++G DIE V ++AA I VK+KD DGIY+ Sbjct: 9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVR---NIILRKENSK--IIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKS-------DRIAKIIGEDVKVTVKGEDIIVEGIDIEHVGQTAANIELATKVKDKDRRVFADGIYI 178
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_DESK1 (50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl6p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.047e-28 Identity = 66/185 (35.68%), Postives = 108/185 (58.38%), Query Frame = 3 Query: 90 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTIL 644 +E ++IP+ V V+++ + V+GP+G ++RDF H F + D R + ++ + RK A + T +H+ N+ITGV +GYRYK++ +++HFPI S+ NK + IRNF+GEK R + V V S ++++++G DIE V +AA I V ++D +DGIY+ EK L Sbjct: 8 AEKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLED-----RVVIVETFVADRKQKALVGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIYGNVKVKVSG---EDIIIEGVDIEEVGLTAASIERATRVTDRDRRVFMDGIYIYEKGEAL 184
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_SULTO (50S ribosomal protein L6P OS=Sulfolobus tokodaii GN=rpl6p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.196e-28 Identity = 63/195 (32.31%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653 MK + E ++IP G+ V I I+V+GP+G++ +DF H++ + ++ K+ ++ F R+ A + ++H+ N+ TGVTKGYRY ++ +Y HFP+ + N ++I+N +GEK +R+ ++ GV V VK ++++++G DIE V ++AA I + D DGIY+ +K I E+ Sbjct: 1 MKAVHLYEEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHIS-GIEIRKEDN----KIVVETTFADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKVSGNE--VQIQNLIGEKNIRRAKIMTGVKV----NVKGEDIIVEGQDIEKVGQTAANIELASKITGYDRRVFADGIYIYKKEVIGSEQ 184
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_AERPE (50S ribosomal protein L6P OS=Aeropyrum pernix GN=rpl6p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25 Identity = 65/184 (35.33%), Postives = 109/184 (59.24%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641 E +++P+GV V I+ ++V GP+G++ RDF H + D + ++++F + A + H+ N+I GV G+RYK++ +Y+HFPIN + +K I I NFLGEK +R ++ GV V +VK +++++G D+E V+++AA I VK+KD K +DGIY+ E+ I Sbjct: 9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNS-----VVVESFFAKARQRALVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPINVKV-EGDKFI-ISNFLGEKGLRIARIMPGVKV----QVKGSDVIVEGIDVEKVAQTAANIELATKVKDKDRRKFMDGIYIYEREVI 181
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_PYRKO (50S ribosomal protein L6P OS=Pyrococcus kodakaraensis GN=rpl6p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 66/182 (36.26%), Postives = 105/182 (57.69%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKS 635 E ++IP+GV+V + ++V+GP+G+L R+ K+ + T K+ I F +K A +RT +H+ N+I GVT+G++Y+++ VY+HFP+ + + IE NFLGEK R+ +L GVTV KVK E+ ++G D E V ++AA I + D DGIY+ EK+ Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIF------TEDGKVVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKVQGDEVVIE--NFLGEKNPRRAKILPGVTV----KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_THEON (50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24 Identity = 66/181 (36.46%), Postives = 102/181 (56.35%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKS 635 E ++IP+GV+V I V++V GP+G+L R+ K+ + T K+ I F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + IE NFLGEK R+ +L GVTV + E++++G D E V ++AA I + D DGIY+ EK+ Sbjct: 9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIF------TEDGKVVIYKEFPRKKDIAIARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKVQGDEVVIE--NFLGEKNPRRAKILPGVTV---KVMGSEVIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_THEGJ (50S ribosomal protein L6P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl6p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24 Identity = 66/182 (36.26%), Postives = 104/182 (57.14%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKS 635 E ++IP+GV+V + V++V+GP+G+L R+ K+ + T K+ + F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + IE NFLGEK R+ +L GVTV KV+ E+ ++G D E V ++AA I + D DGIY+ EK+ Sbjct: 9 EEVEIPEGVEVTVENNVVKVKGPKGELERELKYPGVKIF------TEDGKVVVYKEFPRKKDIAIARTFKAHINNMIKGVTEGFTYKLKVVYSHFPVTVKVQGDEVIIE--NFLGEKNPRRAKILPGVTV----KVRGQEITVEGIDKEKVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_PYRAB (50S ribosomal protein L6P OS=Pyrococcus abyssi GN=rpl6p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24 Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 3 Query: 93 ETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKS 635 E ++IP+GV+V + ++V+GP+G++ R+ + + E GK + D F RK A +RT +H+ N+I GVT+G+ YK++ VY+HFPI + + IE NFLGEK R+ +L GVTV KVK E++++G D E V ++AA I + D DGIY+ EK+ Sbjct: 9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFV----EGGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178 The following BLAST results are available for this feature:
BLAST of EY692789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692789 ID=EY692789; Name=EY692789; organism=Citrus sinensis; type=EST; length=905bpback to top |