EY692789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_METAC (50S ribosomal protein L6P OS=Methanosarcina acetivorans GN=rpl6p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 61/185 (32.97%), Postives = 98/185 (52.97%), Query Frame = 3 Query: 90 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK---DELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKS 635 + T++IP+GV V + V GP+G + R + + M D + G+ + +DA + ++ A + T SH+ NL+ GV +G+ KM VYAHFP+ + + K + I NFLGEKK R +I KVK +++ + G + E V ++AA I K +K D DGIY+ +K+ Sbjct: 6 ARTIEIPEGVSVSLAQDVFTATGPKGTVERKLWYPGI----MIDVKDGE--VVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKV--DGKTLIIGNFLGEKKPR------FAKIIGETKVKVSGNDVTITGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQKA 176
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_HALWD (50S ribosomal protein L6P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl6p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 84 LSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSD---KVKDELV-LDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 ++ ++IP+ V +++ + VEGP G ++R + ++ + DE+ + I+ KTSA + T SHV N+I GVT G+ Y+M YAHFP+ S+ + IE NFLGEK R+ T IR D ++ E+V L G E V ++AA I V +KD DG+Y+++K Sbjct: 1 MTRTAIEIPENVSAEVSNLALTVEGPNGSVTRTLWYPSVT--VSVDEDADADAVVIETDETDAKTSATVGTFESHVSNMIHGVTDGWSYEMEVYYAHFPMQVSVEGDEVIIE--NFLGEKASRR-------TPIRGDTNVQIDGEMVTLTGPSKEDVGQTAADIEQLTRVTDKDTRIFQDGVYITQK 176
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_HALSA (50S ribosomal protein L6P OS=Halobacterium salinarium GN=rpl6p PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18 Identity = 55/178 (30.90%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 99 MDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 ++IPD V +++ + VEGP G ++R + ++D + D + + + KT + + T SHV N+ GV++G+ YK+ Y+HFP+ + + + I+NFLGEK R+ + V+ D +E+ L G IE V ++AA I V +KD DG+Y+ EK Sbjct: 6 IEIPDDVTAEVDHLDLTVEGPEGSVTRRLWYPDVDVSVEDDA------VVVASEVDDAKTDSTVGTFESHVANMFHGVSEGWEYKLEVHYSHFPMQVDV--EGEEVVIQNFLGEKAARRTQIRGDTDVVVDD---EEVTLSGPSIEDVGQTAADIEQLTRVTDKDTRVFQDGVYIVEK 172
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_NATPD (50S ribosomal protein L6P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl6p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.852e-17 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 99 MDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSE 629 ++IPD V ++ + VEGP G ++R + ++ D E G ++ D + KT + + T SHV N+ GVT+G+ Y M Y+HFP+ S+ + I I NFLGEK RK + G T + D +EL + G IE V ++AA I V +KD DG+Y++E Sbjct: 5 IEIPDEVTATMDHLEVTVEGPNGSVTRRLWYPDIT----VDVEDGAVVIETDD--DNAKTRSTVGTFESHVTNMFHGVTEGWEYSMEVFYSHFPMQVSVEGGD--IVIENFLGEKAPRKTP-VRGDTSVEVD--GEELTVSGPSIEDVGQTAADIEQLTRVSDKDTRVFQDGVYITE 170
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_HALMA (50S ribosomal protein L6P OS=Haloarcula marismortui GN=rpl6p PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 58/178 (32.58%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 99 MDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 ++IP+ V + + I VEG G ++R + ++D + D +T + I++ + KT + I T SH+ N+ GVT+G+ Y M Y+HFP+ ++ + IE NFLGEK R+ + G T + D +EL + G DIE V ++AA I + +KD+ DG+Y++ K Sbjct: 6 LEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDID--VSVDGDT----VVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIE--NFLGEKAPRRT-TIHGDTDVEID--GEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_NANEQ (50S ribosomal protein L6P OS=Nanoarchaeum equitans GN=rpl6p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17 Identity = 54/182 (29.67%), Postives = 94/182 (51.65%), Query Frame = 3 Query: 105 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKK--VRKVDMLDGVTV-IRSDKVKDELVLDGNDIELVSRSAALINXKCHV--KNKDIXKVLDGIYVSEKS 635 IP+ VKV +++V GP+G++ R F +H + K+ ++ +F +R+ I T SH+ N++ GV + Y+++ Y HFP+ + N +E NFLGEK ++++ LD V V I +K + E+V++ D E A++I K KD + DGI++ K+ Sbjct: 12 IPENVKVSYENNILKVSGPKGEVERKF------YHPLIKLSVNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRVKLEGNKLIVE--NFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYKA 185
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_PYRAE (50S ribosomal protein L6P OS=Pyrobaculum aerophilum GN=rpl6p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.039e-17 Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 3 Query: 72 MKTILSSETMDIPDGVKVKINAK-----VIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXK---------VLDGIYV 623 M+ + S E ++IP GV V I +++V+GP G+++++FK+ + L K+ ++ + ++ A + T + N+ GVT+G+RYK++ +Y HFP+ + N IE NFLG K +++ GV V K K+++V++G D ELVS AA + + + V+DGIYV Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDG------KIVMEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLVKVQGNQLVIE--NFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAATELHGDERPSPHGREGGLGVVDGIYV 188
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_ARCFU (50S ribosomal protein L6P OS=Archaeoglobus fulgidus GN=rpl6p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16 Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 81 ILSSETMDIPDGVKVKINAK-----VIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 + +++P+ V++ I ++ GP+G+ +R K+ + E G K+++ +K A + T H+ NLITGV +G+ Y ++ VYAHFPI + N IE NF+GEK R+ ++ V S + ++ + G DIE ++AA + +K KD DGIY+ +K Sbjct: 18 VYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFI------EVGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKVRVEGNEVIIE--NFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_METKA (50S ribosomal protein L6P OS=Methanopyrus kandleri GN=rpl6p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16 Identity = 52/191 (27.23%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 81 ILSSETMDIPDGVKVKINAKV-----IEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLD--GVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 I+ E + I D V+++I+ + + V+GP+G+++++F + ++ + DE + I A +R+ A + +++ N+ GVT+G+ YK++ VY+HFP + + I NF+GE R +++D VI + ++++ G D E V ++AA + ++K++D DGIY+ EK Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDE------VVIAATRSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEVIVQGQ---DIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL6_METBF (50S ribosomal protein L6P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl6p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.734e-15 Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 3 Query: 99 MDIPDGVKVKINAK-VIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEK 632 ++IP+G+ V + V GP G + R + + ++ E +++DA ++ A + T SH+ NL+ GV +G+ KM +YAHFP+ + + K + I NFLGEKK R +L G T ++ +E+ + G + E V ++AA I K +K D DGIY+ +K Sbjct: 9 IEIPEGISVSFSQDDVFTATGPLGTVERKLWYPGIKIYVRDGE------VEVDAESSRKEQKAMVGTFTSHIKNLMKGVNEGFECKMTILYAHFPMQVKV--DGKTLIIGNFLGEKKPRIAKIL-GETKVKVS--GNEVTVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 176 The following BLAST results are available for this feature:
BLAST of EY692789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692789 ID=EY692789; Name=EY692789; organism=Citrus sinensis; type=EST; length=905bpback to top |