EY692784

Overview
NameEY692784
Unique NameEY692784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692784 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 72/267 (26.97%), Postives = 131/267 (49.06%), Query Frame = 1
Query:   40 IDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPH--EIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQE-ISDAYQEGLYE--VRTTLYPPCPEPER---VIGITQHADYSGITLLLECGNIPGLQV-LKDGQWVTVIPVDGAIVANIXHIMEIMRHGIYKAPDHRAMVNRFKERRSITTFCFPSHXKKL 813
            I +  L DP+++     R+  AC+ +G F+++NHG   E +  ++++A  FF LP   K R G  P    GYG    I     + W + + L   P     +   ++ + P  FRE++E Y +E+++V+  ++  +A  L +E ++ +S   ++   +  +R   YP   E       +G  +H D   I  +L   N  GLQ+ +KDG WV V P   +   N+   +++M +G +K+  HR + +  + R S+  F  P   +K+
Sbjct:   31 IPVVNLADPEAKT----RIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNRAG--PPEPYGYGNK-RIGPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTD-PQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKI 289          
BLAST of EY692784 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 68/257 (26.46%), Postives = 129/257 (50.19%), Query Frame = 1
Query:   34 PLIDMNKLVDPDSQDAELRR-----LHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEG--YGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWP-EHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDA-YQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQWVTVIPVDGAIVANIXHIMEIMRHGIYKAPDHRAMVNRFKERRSI 777
            P+I++N L    S ++E+RR     +  A + +G FQ++NHG   + +  M    ++F +   + K+++  +    +   Y   +V+      +W D     T+   +      P E P   R+ L  YS  +R +   L   ++ AL L+   + +    EGL  +    YP CP+PE   G ++H+D   +T+L++   I GLQ+L + QW+ V  + GA+V NI  +++++ +  +K+ +HR + N+   R S+
Sbjct:   92 PVINLNGL----SSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRD-----TMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLI-LLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISV 337          
BLAST of EY692784 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.934e-17
Identity = 81/290 (27.93%), Postives = 133/290 (45.86%), Query Frame = 1
Query:   37 LIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRT-LPHEIRKLDLWPEHPPK-FRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAY---QEGLYEVRTTLYPPCPEP--ERVIGITQHADYSGITLLLECGNIPGLQV-LKDGQWVTVIPVDGAIVANIXHIMEIMRHGIYKAPDHRAMVNRFKERRSITTFCFPSHXKK---LDCQGFTSQDATFYRLYFAEY 873
            LI +  L D D++     ++  AC+ +G F++INHG   + L  ++++A  FF L    K + G  P    GYG    I     L W + I L   L  E  K      H P  FRE +E Y +EM+++++  +  +   L++E +E        +E    +R   YP   E   +  IG  +H D   I+LL    +  GLQ+ +KDG WV V P   +    +   +++M +G +K+  HR + N  + R S+  F  P   +K   L C      D  +    +++Y
Sbjct:   26 LIPVIDLTDSDAKT----QIVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAG--PPDPFGYGTKR-IGPNGDLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLL-RSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQY 307          
The following BLAST results are available for this feature:
BLAST of EY692784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
G2OX2_ARATH2.067e-1926.97Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
DV4H_CATRO1.340e-1826.46Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
G2OX3_ARATH1.934e-1727.93Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692784 ID=EY692784; Name=EY692784; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGGACGCGTGGGCGATCGTGTACCGTTGATTGATATGAA
CAAGTTAGTCGACCCTGATTCCCAAGATGCAGAGTTACGAAGATTACACT
CTGCTTGCAAACACTGGGGCCTATTCCAGTTGATAAACCATGGAGCAGCT
GATGAATCGCTGAGGAACATGAAGAAGCAAGCTCAAGAGTTCTTTGATCT
TCCTTTAGAAGAAAAGAAGCGCTGGGGGCAGAAGCCAGGAAGTCTTGAAG
GCTATGGTCAAGCATTTGTCATCTCAGAAGAACAAAAACTTGATTGGAAT
GACATGATCTTCCTCAGAACTCTGCCCCATGAAATCAGGAAGTTAGATTT
ATGGCCTGAACACCCCCCAAAATTCAGAGAGACTTTGGAGACTTATTCTG
AAGAGATGAGGAAAGTTGCCACTTCTTTAGTGAGGTCCATGGCTATGGCA
CTTGAGCTTGAGGCTCAAGAAATCTCTGATGCTTACCAAGAAGGACTGTA
TGAAGTGAGGACGACTTTGTATCCTCCTTGTCCTGAACCTGAGCGGGTCA
TTGGGATTACACAACATGCTGATTACTCTGGGATTACTCTCTTGCTCGAG
TGTGGCAACATACCAGGGTTACAAGTCCTAAAGGATGGACAATGGGTCAC
CGTTATACCTGTAGATGGTGCAATTGTGGCAAACATCNGGCACATCATGG
AGATAATGAGGCATGGGATTTACAAAGCACCAGATCACAGAGCTATGGTT
AATAGATTCAAGGAGAGGCGGTCAATAACTACATTCTGCTTTCCCAGTCA
TNANAAAAAATTGGACTGCCAAGGATTTACAAGTCAGGACGCCACTTTTT
ACAGACTCTACTTTGCGGAGTACAGCCATGTTTACATCGAAGGCTGTGTC
CATCATTGACTGCTAAATTAAATCTCCAAGATTT
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