EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 3.358e-54
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MV+YS +P+NPTKSCK+RGS+L VHFKNTRETA AI+ + +  A + L+DV   KQ +PF ++ GGVGR A AK      QGRWP KSA+F+L +LKNAESNA++KGLDVD+L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K PE ++A  +
Sbjct:    1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKK 168          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 3.358e-54
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MV+YS +P+NPTKSCK+RGS+L VHFKNTRETA AI+ + +  A + L+DV   KQ +PF ++ GGVGR A AK      QGRWP KSA+F+L +LKNAESNA++KGLDVD+L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K PE ++A  +
Sbjct:    1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKK 168          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_BOVIN (60S ribosomal protein L17 OS=Bos taurus GN=RPL17 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 3.358e-54
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MV+YS +P+NPTKSCK+RGS+L VHFKNTRETA AI+ + +  A + L+DV   KQ +PF ++ GGVGR A AK      QGRWP KSA+F+L +LKNAESNA++KGLDVD+L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K PE ++A  +
Sbjct:    1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKK 168          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_BOMMO (60S ribosomal protein L17 OS=Bombyx mori GN=RpL17 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.480e-54
Identity = 108/172 (62.79%), Postives = 130/172 (75.58%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSE 575
            M +YS+EPDNP KSCKARGS+L VHFKNT ETA AIRK+PL  A R L++V+  K+ IPF +F GGVGR A AK      QGRWP KSA+F+L LL+NAESNAD K LDVD L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ LS++E+ V +   T  A ++ +
Sbjct:    1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKK 171          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.769e-54
Identity = 107/172 (62.21%), Postives = 129/172 (75.00%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSE 575
            M +YS++P+NP KSCKARGS+L VHFKNT ETA AIRK+PL  A R L++V   K+ IPF +F GGVGR A AK      QGRWP KSA+F L LL+NAESNAD KGLDVD L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ LS++E+ V +   T  A ++ +
Sbjct:    1 MGRYSRDPENPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFPLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVALSEREDAVSRAAPTDDAPAKKK 171          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.769e-54
Identity = 107/173 (61.85%), Postives = 136/173 (78.61%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y+KEPDN +KSCK+RGS+L VHFKNTRETA AI+++PL  A+R L++V+  K+ +PF +F GGVGR A AK+   +  GRWP KSA+F+L LLKNAE+NAD KGLDVD L I+H+QVN+A   RRRTYRAHGRINPYMSSPCHIEL+L+++E+ V K      AT  SE+
Sbjct:    1 MGRYAKEPDNASKSCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKECVPFRRFNGGVGRCAQAKHWGTS-VGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVINHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLTEKEDVVTK------ATDESEQ 166          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_IXOSC (60S ribosomal protein L17 OS=Ixodes scapularis GN=RpL17 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.842e-53
Identity = 108/174 (62.07%), Postives = 129/174 (74.14%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPV-QKEPETQLATSRSEK 578
            M +YS EPDN TKSCKARGS+L VHFKNTRETA AI+ + L  A+R L++V+A K+ +PF +F GGVGR A AK      QGRWP KSA+F+  LL+NAESNAD KGLDVD L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ LS++E+ V    PE      +  K
Sbjct:    1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKHMALRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAFGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIEVILSEKEQVVAAPSPEEDAPKKKQSK 173          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.842e-53
Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPV 533
            M +YS EPDN TKSCKARGS+L VHFKNTRETA AI+++ L  A+R L++V+A K+ +PF +F GGVGR A AK      QGRWP KSA+F+  LL+NAESNAD KGLDVD L I H+QVN+A K RRRTYRAHGRINPYMSSPCH+E+ LS++E+ V
Sbjct:    1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKRMSLRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAWGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHVEVILSEKEQVV 157          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_SUBDO (60S ribosomal protein L17 OS=Suberites domuncula GN=RPL17 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.332e-53
Identity = 107/175 (61.14%), Postives = 129/175 (73.71%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMH-PNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQK-EPETQLATSRSEK 578
            M +Y+ EP+NP KSCKARG DL VHFKNTRETA AI+ + L  A R L DV+  KQ IPF +F GGVGR A AKN   P  QGRWP KSA+F++ LL+NAESNA+VK L+ DAL I H+QVN+A   RRRTYRAHGRINPYM+SPCHIE+ L +++E V K E +T      S+K
Sbjct:    1 MGRYAIEPENPAKSCKARGEDLRVHFKNTRETAQAIKGMHLKKALRYLNDVIEKKQIIPFRRFSGGVGRKAQAKNFKTPGSQGRWPKKSAQFLIQLLRNAESNAEVKMLNTDALVIDHIQVNRAAHLRRRTYRAHGRINPYMTSPCHIEMFLVEKDEAVPKGEDDTAQKKKVSQK 175          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_PHLPP (60S ribosomal protein L17 OS=Phlebotomus papatasi GN=RpL17 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.332e-53
Identity = 103/173 (59.54%), Postives = 129/173 (74.57%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y++EPDN TKSCK+RGS L VHFKNT E A+AI+ +PL  A+R L++V+  K+ +PF +F GGVGR A AK      QGRWP KSA+F+L LL+NAESNAD KGLDVD L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ L+++EE V K  + +    +  K
Sbjct:    1 MGRYAREPDNATKSCKSRGSHLRVHFKNTHEAANAIKHMPLRRAQRFLKNVVEKKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILTEKEEVVAKATDEEPTKKKLSK 172          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL17_RAT3.358e-5461.7660S ribosomal protein L17 OS=Rattus norvegicus GN=... [more]
RL17_MOUSE3.358e-5461.7660S ribosomal protein L17 OS=Mus musculus GN=Rpl17... [more]
RL17_BOVIN3.358e-5461.7660S ribosomal protein L17 OS=Bos taurus GN=RPL17 P... [more]
RL17_BOMMO7.480e-5462.7960S ribosomal protein L17 OS=Bombyx mori GN=RpL17 ... [more]
RL17_LONON9.769e-5462.2160S ribosomal protein L17 OS=Lonomia obliqua GN=Rp... [more]
RL17_ANOGA9.769e-5461.8560S ribosomal protein L17 OS=Anopheles gambiae GN=... [more]
RL17_IXOSC2.842e-5362.0760S ribosomal protein L17 OS=Ixodes scapularis GN=... [more]
RL17_ARGMO2.842e-5365.8260S ribosomal protein L17 OS=Argas monolakensis GN... [more]
RL17_SUBDO6.332e-5361.1460S ribosomal protein L17 OS=Suberites domuncula G... [more]
RL17_PHLPP6.332e-5359.5460S ribosomal protein L17 OS=Phlebotomus papatasi ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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