EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DROPS (60S ribosomal protein L17 OS=Drosophila pseudoobscura pseudoobscura GN=RpL17 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.842e-52
Identity = 101/173 (58.38%), Postives = 129/173 (74.57%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +YS+E DN TKSCKARG +L VHFKNT ETA AI+++PL  A+R L+ V+  K+ +PF +F GGVGR A AK      QGRWP KSA+F+L LL+NAE+NAD KGLD D + + H+QVN+AQ  RRRTYRAHGRINPYMSSPCH+E+ L+++EE V K  + + A  +  K
Sbjct:    1 MGRYSRESDNVTKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRFLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRMVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEEVVSKAVDDEPAKKKLSK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DIACI (60S ribosomal protein L17 OS=Diaphorina citri GN=RpL17 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.406e-52
Identity = 104/165 (63.03%), Postives = 123/165 (74.55%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQ 554
            M +YSKEP NPTKSCKARGS+L VHFKNTRETA  I K+PL  A + L++V    + +PF ++ GGVGR A AK      QGRWP KSA F+L LLKNAESNAD +GLD D L I H+QVN+A + RRRTYRAHGRINPYMSSPCHIE+ LS++E  V K  E +
Sbjct:    1 MGRYSKEPRNPTKSCKARGSNLRVHFKNTRETAKTISKMPLRRAIKFLKNVKDQLECVPFRRYNGGVGRCAQAKQWGTT-QGRWPRKSADFLLQLLKNAESNADYRGLDTDRLVIEHIQVNRAPRLRRRTYRAHGRINPYMSSPCHIEVILSERERVVAKPREDE 164          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.406e-52
Identity = 101/159 (63.52%), Postives = 120/159 (75.47%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQK 539
            V YS+ P+N TKSCKARGSDL VHFKNT E A A+R +PL  A+  L  V  HK+ +PF +F GG+GR A  K  +   QGRWPVKSA F+LDLLKNAESNA+ KGLDVD L I H+ V +A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K
Sbjct:    4 VHYSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILAEKEDVVSK 161          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DROME (60S ribosomal protein L17 OS=Drosophila melanogaster GN=RpL17 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.104e-52
Identity = 101/173 (58.38%), Postives = 128/173 (73.99%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +YS+E DN  KSCKARG +L VHFKNT ETA AI+++PL  A+R L+ V+  K+ +PF +F GGVGR A AK      QGRWP KSA+F+L LL+NAE+NAD KGLD D L + H+QVN+AQ  RRRTYRAHGRINPYMSSPCH+E+ L+++EE V K  + + A  +  K
Sbjct:    1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKATDDEPAKKKLSK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_BIPLU (60S ribosomal protein L17 OS=Biphyllus lunatus GN=RpL17 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.001e-52
Identity = 105/173 (60.69%), Postives = 126/173 (72.83%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y++EPDN  KSCKARGS+L VHFKNT ETA+AIRK+PL  A   L++V A K+ +PF +F GGVGR A AK      QGRWP KSA+F+L LL+NAESNAD  GLDVD L + H+QVN+A   RRRTYRAHGRINPYMSSPCHIEL L++ E   +   +    TS  EK
Sbjct:    1 MGRYAREPDNAGKSCKARGSNLRVHFKNTCETANAIRKMPLKRAVAYLKNVTAQKECVPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFLLQLLRNAESNADYSGLDVDRLVVQHIQVNRAACLRRRTYRAHGRINPYMSSPCHIELWLTEAESVPEAAKKPGKKTSAVEK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DROYA (60S ribosomal protein L17 OS=Drosophila yakuba GN=RpL17 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 9.144e-52
Identity = 100/173 (57.80%), Postives = 127/173 (73.41%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +YS+E DN  KSCKARG +L VHFKNT ETA AI+++PL  A+R L+ V+  K+ +PF +F GGVGR A AK      QGRWP KSA+F+L LL+NAE+NAD KGLD D L + H+QVN+AQ  RRRTYRAHGRINPYMSSPCH+E+ L+++EE V K  + +    +  K
Sbjct:    1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEEVVSKATDDEPTKKKLSK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_AGRLI (60S ribosomal protein L17 OS=Agriotes lineatus GN=RpL17 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.011e-50
Identity = 104/179 (58.10%), Postives = 129/179 (72.07%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQ------KEPETQLATSRSEK 578
            M +YS+EP+   KSCKARGS+L VHFKNT ETA+AIRK+PL  A   L++V+ HK+ +PF +F GGVGR A AK      QGRWP KSA+F+L +L+NAESNAD  GLDVD L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ L++ E   +      K+  T+ A  +S K
Sbjct:    1 MGRYSREPEIAAKSCKARGSNLRVHFKNTCETANAIRKMPLKRAVAYLKNVIGHKECVPFRRFNGGVGRCAQAKQWGTT-QGRWPKKSAEFLLQMLRNAESNADYSGLDVDRLVIEHIQVNRAACLRRRTYRAHGRINPYMSSPCHIEMWLTEAESTPEGAKKGKKKKGTKDAVEKSSK 178          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_CARGR (60S ribosomal protein L17 OS=Carabus granulatus GN=RpL17 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.553e-50
Identity = 102/175 (58.29%), Postives = 128/175 (73.14%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQ--KEPETQLATSRSEK 578
            M +YS+EPD  +K+CKARGS+L VHFKNTRETA AI+K+ L  A+  L++V  HK+ +PF +F GGVGR + AK      QGRWP KSA+F+L +L+NAESNAD  GLDVD L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ L++ E  V   K+ + +  T   EK
Sbjct:    1 MGRYSREPDVASKTCKARGSNLRVHFKNTRETAMAIKKMSLRRAQAFLKNVTDHKECVPFRRFNGGVGRCSQAKQWGTT-QGRWPKKSAEFLLQMLRNAESNADYSGLDVDRLVIEHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEMWLTEAESGVDGAKQGKKKKKTDGVEK 174          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_MACHI (60S ribosomal protein L17 OS=Maconellicoccus hirsutus GN=RpL17 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.118e-49
Identity = 96/160 (60.00%), Postives = 124/160 (77.50%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQK 539
            M KY+K   NP KSC+ARGS+L VHFKNTRETA  I+++PL  A + L++V   ++ +PF +F GGVGR A AK      QGRWP+KSA+F+L+LL+NAESNA+ KGLD D L+I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ L+++++ V K
Sbjct:    1 MGKYAKNARNPAKSCRARGSNLRVHFKNTRETAKTIKRMPLRRAIQFLKNVQDKQECVPFRRFNGGVGRCAQAKQWGTT-QGRWPIKSAQFLLELLRNAESNAEFKGLDSDRLFIEHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILTEKQKYVGK 159          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_PECGU (60S ribosomal protein L17 OS=Pectinaria gouldii GN=rpl-17 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.696e-48
Identity = 94/173 (54.34%), Postives = 122/173 (70.52%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y   P+NP + CKA+G++  VH+KNT ET  AI+ + L  A+  L +V+ HKQ IPF +  GGVGR A AKN +   QGRWP KS +F+L LLKNAESNA+++GLDVD+L ++H+ V+ A K RRRTYRAHGRINPYMSSPCHIEL L +++  V K      A  +S K
Sbjct:    1 MARYKFNPENPNRVCKAKGTNFRVHYKNTSETGRAIKGMHLHKARSYLSNVVEHKQCIPFRRHKGGVGRCAQAKNFNTT-QGRWPKKSCEFMLQLLKNAESNAELRGLDVDSLVVAHVSVDAAAKMRRRTYRAHGRINPYMSSPCHIELCLEERDRVVPKGDIKTAAKKQSAK 172          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL17_DROPS1.842e-5258.3860S ribosomal protein L17 OS=Drosophila pseudoobsc... [more]
RL17_DIACI2.406e-5263.0360S ribosomal protein L17 OS=Diaphorina citri GN=R... [more]
RL17_CAEEL2.406e-5263.5260S ribosomal protein L17 OS=Caenorhabditis elegan... [more]
RL17_DROME4.104e-5258.3860S ribosomal protein L17 OS=Drosophila melanogast... [more]
RL17_BIPLU7.001e-5260.6960S ribosomal protein L17 OS=Biphyllus lunatus GN=... [more]
RL17_DROYA9.144e-5257.8060S ribosomal protein L17 OS=Drosophila yakuba GN=... [more]
RL17_AGRLI1.011e-5058.1060S ribosomal protein L17 OS=Agriotes lineatus GN=... [more]
RL17_CARGR6.553e-5058.2960S ribosomal protein L17 OS=Carabus granulatus GN... [more]
RL17_MACHI1.118e-4960.0060S ribosomal protein L17 OS=Maconellicoccus hirsu... [more]
RL17_PECGU4.696e-4854.3460S ribosomal protein L17 OS=Pectinaria gouldii GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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