EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 8.010e-48
Identity = 95/168 (56.55%), Postives = 123/168 (73.21%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRS 572
            YSK P NP KSCK+RGS+L +HFKNTRE+A AI+ + LT AK  L +V+AH++ IPF +F GGVGRT  AK +    QGRWP KS + IL LL+NAE+NA+ KGL+V+ L I+H+QV +AQ++RRRTYRAHGRINPYM SP  +E  L++ E+ V K  E      +S
Sbjct:    6 YSKTPSNPEKSCKSRGSNLRIHFKNTRESAMAIKGMLLTRAKAYLNNVLAHRECIPFRRFKGGVGRTGQAK-IFGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILTEVEKAVPKPAEESAQKKKS 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.721e-45
Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQK 539
            MV+Y+     P KS ++RGS L V FKNTRETA AI    L  A++ LE+V+  K+A+P  ++ GG GR A  K    + + RWP KSA+F+L LLKNAE+NAD KGLD   L + H+QVNQA K+RRRTYRAHGRINPYMS+PCHIEL L++ +E VQK
Sbjct:    1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGKQFGVS-RARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILTEADEVVQK 159          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.721e-45
Identity = 92/162 (56.79%), Postives = 115/162 (70.99%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPE 548
            V+Y+ +     KS +ARGS L V FKNTRETA AI  + L  A   LE+V    + +PF ++ G +GRTA  K    + + RWPVKSA+F+LDLLKNAE+NAD KGLD   L + H+QVNQA K RRRTYRAHGRINPYM++PCHIEL L++ EE VQK P+
Sbjct:    9 VRYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILTEGEETVQKAPQ 169          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.347e-45
Identity = 92/165 (55.76%), Postives = 118/165 (71.52%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQ 554
            MVKYS+EP N T+S KA G+ L VHFKNT ETA AI+ + + +AKR L DV+  K+ +PF +F GGVGR A AK    + QGRWP KS KF+LDLLKN ESNA+VKGL+   L + H+QVN+A   RRR+YRAHGRI P++S PCH+EL   + E+ V +   T+
Sbjct:    1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIERKRCVPFRKFRGGVGRCAQAKAFK-HTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVELIAVEDEDHVPRHTSTE 164          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.289e-45
Identity = 93/173 (53.76%), Postives = 120/173 (69.36%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            MVKYS+EP N T+S KA G+ L VHFKNT ETA AI+ + + +AKR L DV+  K+ +PF +F GGVGR A AK    + QGRWP KS KF+LDLLKN ESNA+VKGL+   L + H+QVN+A   RRR+YRAHGRI P++S PCH+EL   + E+ V +   T+    +  K
Sbjct:    1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIDRKRCVPFRKFRGGVGRCAQAKAFK-HTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVELIAVEDEDHVPRHTPTEKKVVKMNK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.083e-44
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPET 551
            MV+YS  P   TK  KARG+ L  HFKN+RE A  I  + L  A   L++V  HKQA+PF +F GGVGRTA  K      Q RWPVKS KF  DLLKNAE+NA+ KGLD+D L I H+QVN A K+RRRTYRAHGR+  Y+SSP HIE+ ++++EE V K  +T
Sbjct:    1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPKANDT 163          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4)

HSP 1 Score: 178.718 bits (452), Expect = 4.114e-44
Identity = 94/172 (54.65%), Postives = 116/172 (67.44%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLA--TSR 569
            M +Y     NP KS  ARGS L V FKNTRETA AI    LT A++ LE V+ H++AIPF +F   +GRTA  K      + RWP KS KF+  LL+NA +NA+ KGLD   LY+SH+QVNQA K+RRRTYRAHGRIN Y SSP HIEL ++++EE V K  E ++   TSR
Sbjct:    1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSR 171          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.017e-44
Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPET 551
            MV+YS  P   TK  KARG+ L  HFKN+RE A  I  + L  A   L++V  HKQA+PF +F GGVGRTA  K      Q RWPVKS  F  DLLKNAE+NA+ KGLD+D L I H+QVN A K+RRRTYRAHGR+  Y+SSP HIE+ ++++EE V K  +T
Sbjct:    1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPKANDT 163          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 9.165e-44
Identity = 93/172 (54.07%), Postives = 116/172 (67.44%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLA--TSR 569
            M +Y     NP KS  ARGS L V FKNTRETA AI    LT A++ L+ V+ H++AIPF +F   +GRTA  K      + RWP KS KF+  LL+NA +NA+ KGLD   LY+SH+QVNQA K+RRRTYRAHGRIN Y SSP HIEL ++++EE V K  E ++   TSR
Sbjct:    1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSR 171          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.940e-43
Identity = 87/165 (52.73%), Postives = 113/165 (68.48%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQ 554
            MV+Y+    NP KS  ARGS L V +KNTRETA AI    L  A++ L+ V+ H++AIPF +F   +GRT   K      + RWP KS  FI DLL+N ++NA+ KGLD   L +SH+QVNQA K+RRRTYRAHGRIN Y SSPCHIEL L+++ E V+K  +++
Sbjct:    1 MVRYAATSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILTEENEAVEKADDSK 164          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL17_DICDI8.010e-4856.5560S ribosomal protein L17 OS=Dictyostelium discoid... [more]
RL17_NEUCR3.721e-4556.8860S ribosomal protein L17 OS=Neurospora crassa GN=... [more]
RL17_ASPFU3.721e-4556.7960S ribosomal protein L17 OS=Aspergillus fumigatus... [more]
RL17_THEPA6.347e-4555.7660S ribosomal protein L17 OS=Theileria parva GN=RP... [more]
RL17_THEAN8.289e-4553.7660S ribosomal protein L17 OS=Theileria annulata GN... [more]
RL17A_SCHPO1.083e-4456.1060S ribosomal protein L17-A OS=Schizosaccharomyces... [more]
RL17A_YEAST4.114e-4454.6560S ribosomal protein L17-A OS=Saccharomyces cerev... [more]
RL17B_SCHPO7.017e-4455.4960S ribosomal protein L17-B OS=Schizosaccharomyces... [more]
RL17B_YEAST9.165e-4454.0760S ribosomal protein L17-B OS=Saccharomyces cerev... [more]
RL17_DEBHA5.940e-4352.7360S ribosomal protein L17 OS=Debaryomyces hansenii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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