EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_METST (50S ribosomal protein L22P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.513e-17
Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            YS +P    K  KA G  L +  K++ E    IR + L +AK  LEDV+A K  +PF +    VG   H  ++     GR+PVK+A  IL +L+NAE+NA+ + LDV+ L + H+  N+    R  T RA GR +P  +   HI++ L +
Sbjct:    7 YSYQPKADEKIAKAAGHSLKISPKHSVEICRTIRNMYLEDAKAFLEDVIAKKTVVPFKRHNKKVG---HRSDLKGWPSGRYPVKAAAAILKVLENAEANAENEELDVENLKLVHVCANRGVIIRGWTPRAFGRASPSNTPTTHIQIVLGE 153          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_PYRKO (50S ribosomal protein L22P OS=Pyrococcus kodakaraensis GN=rpl22p PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.287e-17
Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 3
Query:   51 SAAMVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            S     YS +  +P +  +A G DL +  K++ E    IR + L +A R L+DV+A K+ +P  +F    G     K     G GR+PVK AK +  +L NA++NA+ KGLDVD L I H   ++    R    RA GR  P+     HIE+ + +
Sbjct:    2 SRGRFSYSFQNFDPERMARASGRDLRISPKHSVELLREIRGMMLNDALRYLDDVIAKKRPVPMKRFNDSQGH----KPGKGFGPGRYPVKVAKAVKKILLNAKNNAEQKGLDVDRLKIIHAAAHRGPVLRGYIPRAFGRATPFNEQTTHIEIVVEE 153          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_METKA (50S ribosomal protein L22P OS=Methanopyrus kandleri GN=rpl22p PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   69 YSKEPD--NPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQ-GRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQ 521
            YS  P+  +  ++ KA   +L +  K+ RE   AIR +PL  AK  L  V+  ++A+PF +      +  H + + P    GR+P K+A+ IL +L++AE+NA+ KGLD D LYI H+  ++ +  R    RA GR  P+ +   HIE+ L ++
Sbjct:    9 YSIPPEELDDERTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKH---KKKVPHRRQIRPGWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVILEER 159          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 50/156 (32.05%), Postives = 85/156 (54.49%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEE 527
            M  YS   D    + +AR  +  +  K+    AH IR + L  AK+ LEDV++ K AIP+ ++   V            G GR+PVK+AK  +DLL N E+NA+ KG++ D+L I H+  N+ +  ++ T +A+GR         ++E+ +++ ++
Sbjct:    1 MKGYSMSVDE--NNARARIVEADISLKDAVNIAHHIRGMKLDYAKQILEDVVSKKYAIPYFRYLDSVSHRPG------KGPGRYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVIVTEGDQ 148          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 3
Query:   66 KYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQE 524
            +YS E + P ++ KA   D+++ +K T ET   I+   +  A+R L ++   K+++P  ++   VG  +        G GR+PVK AK +L LL N E+NA+ KGL+V+ L I H   ++  K R    RA GR  PY     H+E+   + E
Sbjct:    5 RYSVELE-PERTAKASLRDVSMSYKLTVETLRLIKGKSIEEARRILTEIAEMKRSVPLKRYNKKVGHRSDVP-----GPGRYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEIIAREVE 151          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 46/150 (30.67%), Postives = 87/150 (58.00%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTL 512
            + YS + D P  + +    D  +  K+++  A  I+ + + +A+  L+DV+A +Q++PF Q   GVG   H  ++     GR+P K++K  L+L++N  SNA+ +G D +A+ I H+  ++  +R+ R  RA G  +P+ ++ C +EL +
Sbjct:    3 INYSVKAD-PETTARGMLRDRPISLKHSKAIAREIKGMTIADAESYLDDVIAQRQSVPFRQHNSGVG---HRSDIDGWDAGRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_METTH (50S ribosomal protein L22P OS=Methanobacterium thermoautotrophicum GN=rpl22p PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 49/154 (31.82%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   57 AMVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            A VKY+ + ++ + + +A  + L +  K+  E    IR + L  AK+ LE+V+  ++ + F ++   VG   H + ++    GR+PVK+A  IL +L+NAE+NA+ KGLD + L I H+  ++    R    RA GR  P+ +   H+++ L +
Sbjct:    2 AKVKYAYKEEDRSGTARASATHLKISPKHAVEICREIRGMELEKAKKYLEEVIRMERPVAFKRYNRKVG---HRRGLNGWASGRYPVKAAGQILKVLENAEANAEYKGLDTEKLRIIHISSHRGPVIRGWIPRAFGRATPFNTPTTHVQIVLGE 152          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 50/146 (34.25%), Postives = 81/146 (55.48%), Query Frame = 3
Query:   96 KSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQ---GRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQE 524
            KS KA   D  + +K   E A  ++ + +  A+R LE V   ++ IP  ++ G   + AH + +    +   GR+PVK+AK +L LL N  +NA+VKGLD + L I H+ V++ +  +R   RA GR  P      HIE+ ++++E
Sbjct:   14 KSAKAMVWDAPISYKKIVELARLLKGMKVDEARRFLERVARGEEPIPVRRYSG---KQAHHRGLAAKYKWPIGRYPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIVVAEEE 156          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_THEAC (50S ribosomal protein L22P OS=Thermoplasma acidophilum GN=rpl22p PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 48/156 (30.77%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEE 527
            M  YS E +      + R +D+++  K++   AH +R +PL+ AK  ++ V+    AIP+ ++   V   +H   + P   GR+PVK+AK    LL+N E+NA+ KGL+ D L I H+  N+ +  ++ T +A+GR         ++E+ +++  E
Sbjct:    4 MKGYSMEIEGNHAKARIREADISL--KDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSV---SHRPGVGP---GRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVTEGSE 151          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  105 KARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            +A+ ++L V  K++ E A  I+ +  T AK  L DV+A K+AIPF +F   V   AH + +     GR+PVK+A+  + LL++ E NA+  GLDV+ L I H   N  +  R    RA GR  P      +IE+ +++
Sbjct:   17 RAKANELPVSPKHSIEIARFIKNMTTTEAKAYLTDVVALKKAIPFKRFNRNV---AHKRGLSKWPAGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVTE 151          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL22_METST2.513e-1737.3350S ribosomal protein L22P OS=Methanosphaera stadt... [more]
RL22_PYRKO4.287e-1735.2650S ribosomal protein L22P OS=Pyrococcus kodakarae... [more]
RL22_METKA5.599e-1735.0650S ribosomal protein L22P OS=Methanopyrus kandler... [more]
RL22_THEVO9.550e-1732.0550S ribosomal protein L22P OS=Thermoplasma volcani... [more]
RL22_THEPD3.629e-1633.9950S ribosomal protein L22P OS=Thermofilum pendens ... [more]
RL22_HALWD3.629e-1630.6750S ribosomal protein L22P OS=Haloquadratum walsby... [more]
RL22_METTH4.740e-1631.8250S ribosomal protein L22P OS=Methanobacterium the... [more]
RL22_HYPBU1.056e-1534.2550S ribosomal protein L22P OS=Hyperthermus butylic... [more]
RL22_THEAC1.167e-1430.7750S ribosomal protein L22P OS=Thermoplasma acidoph... [more]
RL22_METMJ1.167e-1436.2350S ribosomal protein L22P OS=Methanoculleus maris... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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