EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.525e-14
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            YS +  +P +  +A G DL +  K   E    +R + L +A R L++V+A K+ +P  ++    G     K     G GR+PVK AK I  +L NA++NA+ KGLD D L I H+  ++    R    RA GR  P+     HIE+ + +
Sbjct:    7 YSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDEVIALKRPVPLRRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVVVEE 152          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_HALMA (50S ribosomal protein L22P OS=Haloarcula marismortui GN=rpl22p PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14
Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQE 524
            + YS E D P  + KA   +  + FK+++  A  I+      A   LE V+   Q +PF Q   GVG   H   +     GR+P K++K  LDLL+NA  NAD +G D +A+ I H+  ++  +++ R  RA GR + + S    +EL L + E
Sbjct:    3 ISYSVEAD-PDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVG---HKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEPE 152          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.397e-14
Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            YS +  +P +  +A G DL +  K   E    +R + L +A R L+DV+A ++ +P  ++    G     K     G GR+PVK AK I  +L NA++NA  KGLD D L I H+  ++    R    RA GR  P+     HIE+ + +
Sbjct:    7 YSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVVEE 152          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_HALSA (50S ribosomal protein L22P OS=Halobacterium salinarium GN=rpl22p PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.397e-14
Identity = 46/155 (29.68%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEE 527
            + YS + D+   S KA   + ++  K+++  A  I    + +AK  L+ V+  ++++PF Q   GVG   H  ++     GR+P K++K  L LL N  +NAD +G D D + I H+  ++  + + R  RA GR   + ++ C +E+ +++ EE
Sbjct:    3 ISYSVDVDSEA-SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVG---HRNDIDGWDAGRYPEKASKDFLKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGRATTWNATLCDVEIVVTETEE 153          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.883e-14
Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3
Query:   96 KSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            K  KA   ++    ++      AIR + L  A+  L +V+  K+A+PF ++  G    ++         GR+P K+ K++L LL NAE+NA+ KGLD+D L I H+  ++    +R   RA GR         HIE+ L +
Sbjct:   15 KLAKAVIKNIDASVRDLYNVCKAIRGMNLKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVILGE 155          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13
Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQ--------GRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            YS +  + ++  KA   ++ VH K   E A AI  + +  A+R L  V+  ++A+PF        R AH K  H  G         GR+PVK+A+++L LL N E+NA  K LDV+ L I H+  ++    +R   RA GR  P      HIE+ + +
Sbjct:    6 YSVKLRDESEVAKAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPF--------RRAHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEIMVRE 155          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 48/153 (31.37%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQ---GRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            Y K   +  K  KA   ++    ++      AIR + L +AK+ L +V+  K+A+PF +   G    +H  N+ P  +   GR+P K+ K++L +L+NAE+NA+ KGLD++ + I H+  ++    +R   RA GR         HIE+ L +
Sbjct:    6 YPKLDIDENKLAKAVIKNVPASIRDLYNVCKAIRGMKLNDAKQFLNNVLEEKEALPFWKHSHGA---SHRSNISPKWKVKSGRYPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVILGE 155          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 3
Query:   69 YSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            YS +  +P +  +A   DL +  K   E    +R + L +A R L+DV+A K+ +P  ++    G     K     G GR+PVK AK I  +L N ++NA  KGLD D L I H+  ++    R    RA GR  P+     HIE+ + +
Sbjct:    7 YSFQNFDPKRMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVVEE 152          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_UNCMA (50S ribosomal protein L22P OS=Uncultured methanogenic archaeon RC-I GN=rpl22p PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.905e-13
Identity = 49/152 (32.24%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            V Y+ E D P  + KA   ++ V  K+ +E    IR + L+ AK  L+DV+  K+++PF Q    VG   H         GR+PVK++  IL LLK+AE+NA+ KGL+ + + I H    + +  +    RA GR   +      +E+ + +
Sbjct:    4 VGYTAEFD-PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGHKRHQSGWP---SGRYPVKASTEILKLLKHAEANAEYKGLETENMRIIHSTSKKGRVIQGIMPRAMGRATAWNIELVTVEVVIGE 151          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL22_METTP (50S ribosomal protein L22P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl22p PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.905e-13
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 3
Query:   63 VKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSD 518
            + YS  P+   +  +A G +L +  K+ RE   AIR + +  A+R L+DV+A K+A+PF ++   V    H   +     GR+P K+A+ +L +L+NA  NA+ KGL+ + L I +    + +  R    RA GR  P       IE+ L++
Sbjct:    4 LNYSITPEG--RFARAMGVELPISPKHAREICRAIRGMKVEAAERFLQDVIALKRAVPFRRYNRNV---PHRHGLVGWPAGRFPQKAARAVLRVLENAIGNAEYKGLEKERLVIGYANTKKGRTFRGWMPRAMGRATPKNQETVSIEMILTE 150          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL22_PYRHO1.525e-1434.0050S ribosomal protein L22P OS=Pyrococcus horikoshi... [more]
RL22_HALMA2.601e-1433.7750S ribosomal protein L22P OS=Haloarcula marismort... [more]
RL22_PYRAB3.397e-1434.0050S ribosomal protein L22P OS=Pyrococcus abyssi GN... [more]
RL22_HALSA3.397e-1429.6850S ribosomal protein L22P OS=Halobacterium salina... [more]
RL22_SULAC9.883e-1431.9150S ribosomal protein L22P OS=Sulfolobus acidocald... [more]
RL22_AERPE1.686e-1333.5450S ribosomal protein L22P OS=Aeropyrum pernix GN=... [more]
RL22_SULTO2.875e-1331.3750S ribosomal protein L22P OS=Sulfolobus tokodaii ... [more]
RL22_PYRFU2.875e-1333.3350S ribosomal protein L22P OS=Pyrococcus furiosus ... [more]
RL22_UNCMA4.905e-1332.2450S ribosomal protein L22P OS=Uncultured methanoge... [more]
RL22_METTP4.905e-1332.2450S ribosomal protein L22P OS=Methanosaeta thermop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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