EY692773

Overview
NameEY692773
Unique NameEY692773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.010e-41
Identity = 76/95 (80.00%), Postives = 88/95 (92.63%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKVK ITP GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+VDQS+QSFLDDDQ+ EGFVLTCAAYPTSDVTIETH+EE++
Sbjct:    1 ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_WHEAT (Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39
Identity = 83/141 (58.87%), Postives = 97/141 (68.79%), Query Frame = 2
Query:   26 ATLLSAMVSTSFLRSKPTATSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            A  LS     S     P A  +   P    ++   K  RG R+ A ATYKVKL+TP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +DQS+QSFLDDDQM  G+VLTC AYP SD+ IETHKEEEL
Sbjct:    2 AAALSLRAPFSLRAVAPPAPRVALAP-AALSLAAAKQVRGARLRAQATYKVKLVTPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEEL 141          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 451
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSC GKV +GTVDQ +QSFLDDDQ+  GFVLTC AYP  DVTIETHKEE++A
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDIA 96          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  161 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  161 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39
Identity = 76/95 (80.00%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKV L TP G++ I CPDDT+ILDAAEEAGLDLPYSCRAGACSSC GKV +GTVDQS+QSFLDD QM  GFVLTC AYPTSD TI THKEE+L
Sbjct:    1 ATYKVTLKTPSGDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER1_PHYAM (Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSCTGKV +GTVDQ +QSFLDDDQ+  GFVLTC A+P  DVTIETHKEE++
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCTGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAFPKGDVTIETHKEEDI 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.148e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            ATYKVKL+TP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM EGFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          
The following BLAST results are available for this feature:
BLAST of EY692773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER3_RAPSA2.010e-4180.00Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1[more]
FER_WHEAT1.881e-3958.87Ferredoxin, chloroplastic OS=Triticum aestivum GN=... [more]
FER1_PHYES2.457e-3976.04Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_DATST4.190e-3976.29Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU4.190e-3976.29Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_SYNY45.473e-3977.08Ferredoxin OS=Synechocystis sp. (strain PCC 6714) ... [more]
FER_SYNY35.473e-3977.08Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803... [more]
FER_SCEQU5.473e-3980.00Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER1_PHYAM5.473e-3975.79Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1[more]
FER_DATME7.148e-3976.29Ferredoxin OS=Datura metel PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-C08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692773 ID=EY692773; Name=EY692773; organism=Citrus sinensis; type=EST; length=691bp
TTCCAGATCTGACCCACGCGTCCGGGCCACCCTTTTAAGCGCCATGGTAA
GCACCTCATTCCTCAGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATG
CCTAACATGGGTCAGGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCG
TGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTACACCTGGGGGAG
AGGAAGAAATCAACTGTCCTGATGACACGTTTATTCTTGATGCTGCTGAA
GAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTC
CTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCT
TTCTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCT
TATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGC
TGGTTAATAATGTGCTCTTGATATCTCATTATTATCTTCTCTTTTATGTG
TTGTGTTTTGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAGTAATT
TGAGAATGATTCTTGTAATGTGTTTTTATTTCTTGTTGCAAAGAAGTTGT
AATTGCACCGGCCATGAATGCGCATCGTACCTAGAGGGTGAGGTTTCTCA
TCCCATCCGAACATGGTACCGTTCTATAAAANANAAANAAN
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