EY692773

Overview
NameEY692773
Unique NameEY692773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.922e-37
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKVKL+TP G++E +CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV  G VDQS+ SFLDD+QM +G+VLTC A+PTSDV IETHKEEEL
Sbjct:    1 ATYKVKLVTPQGQQEFDCPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEEEL 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE L G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALTG 97          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 2
Query:  143 GGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            G R+   ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG +DQS+QSFLDDDQ+  G+VLTC AYP SDV IETHKE++L
Sbjct:   37 GDRLRMQATYNVKLITPDGEVELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 2
Query:  143 GGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            G R+   ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG +DQS+QSFLDDDQ+  G+VLTC AYP SDV IETHKE++L
Sbjct:   37 GDRLRMQATYNVKLITPDGEVELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKVKL+TP G  E  CPDD +ILD AEE G DLPYSCRAG+CSSC GK+ +G+VDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:    1 ATYKVKLVTPDGPVEFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            ATYKVKLITP G    +CPD+ +ILDAAEE G DLPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:    1 ATYKVKLITPDGPVVFDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_CAPAA (Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 2
Query:  164 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            A+YKVKLITP G  E +CPDD +ILD AEEAG DLPYSCRAG+CSSC GK+  G VDQ++ +FLDDDQ+ EG+VLTC AYP SDVTIETHKE EL G
Sbjct:    1 ASYKVKLITPDGPIEFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG 97          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.320e-36
Identity = 68/95 (71.58%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  170 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 454
            +KVKL+TP G +E  CPDD +ILD AEE G++LPYSCRAG+CSSC GK+V G +DQS+QSFLDD+Q+ EG+VLTCAAYP SDV IETHKEEEL G
Sbjct:    2 FKVKLLTPDGPKEFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEELTG 96          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36
Identity = 70/96 (72.92%), Postives = 82/96 (85.42%), Query Frame = 2
Query:  161 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            MATYKVKL   G ++ I+CPDD +ILDAAEE G+DLPYSCRAGACS+C GKV +G+VDQS+QSFLDD Q+G+GFVLTC AYPTSD TI TH+EE L
Sbjct:    1 MATYKVKLSGEGVDKTIDCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGL 96          
BLAST of EY692773 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36
Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = 2
Query:  161 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 448
            MATYKV L+    G    I+  DDT+ILDAAEE G+DLPYSCRAGACS+C GKVVSGTVDQS+QSFLDDDQ+  GFVLTC AYPTSDVTIETHKEE+L
Sbjct:    1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98          
The following BLAST results are available for this feature:
BLAST of EY692773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FERA_ALOMA3.922e-3773.68Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER_LYCCN5.122e-3773.20Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER1_ORYSJ5.122e-3770.59Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER1_ORYSI5.122e-3770.59Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER_SOLAB6.690e-3773.68Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]
FER_PHYAF6.690e-3775.79Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_CAPAA2.542e-3672.16Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=... [more]
FER_LEUGL3.320e-3671.58Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_GUITH7.397e-3672.92Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3[more]
FER1_SYNP67.397e-3675.51Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 271... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-C08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692773 ID=EY692773; Name=EY692773; organism=Citrus sinensis; type=EST; length=691bp
TTCCAGATCTGACCCACGCGTCCGGGCCACCCTTTTAAGCGCCATGGTAA
GCACCTCATTCCTCAGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATG
CCTAACATGGGTCAGGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCG
TGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTACACCTGGGGGAG
AGGAAGAAATCAACTGTCCTGATGACACGTTTATTCTTGATGCTGCTGAA
GAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTC
CTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCT
TTCTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCT
TATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGC
TGGTTAATAATGTGCTCTTGATATCTCATTATTATCTTCTCTTTTATGTG
TTGTGTTTTGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAGTAATT
TGAGAATGATTCTTGTAATGTGTTTTTATTTCTTGTTGCAAAGAAGTTGT
AATTGCACCGGCCATGAATGCGCATCGTACCTAGAGGGTGAGGTTTCTCA
TCCCATCCGAACATGGTACCGTTCTATAAAANANAAANAAN
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