EY692734

Overview
NameEY692734
Unique NameEY692734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692734 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 8.815e-63
Identity = 118/160 (73.75%), Postives = 132/160 (82.50%), Query Frame = 2
Query:  263 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPL 742
            LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP++T +DSLVGQALF            P   VE PL
Sbjct:    1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAIIIGSDPVPEVENPL 160          
BLAST of EY692734 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.292e-58
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 2
Query:  347 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPL 742
            LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P+
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPI 132          

HSP 2 Score: 26.5646 bits (57), Expect = 2.292e-58
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  774 PDSDGAIDGHWAKV-VSLSFA*GVPGLI*K 860
            PDS+GAIDGH  +  ++      VPG++ K
Sbjct:  144 PDSEGAIDGHLREAGLTFHLLKDVPGIVSK 173          
BLAST of EY692734 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.146e-44
Identity = 88/113 (77.88%), Postives = 95/113 (84.07%), Query Frame = 2
Query:  404 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPL 742
            ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P+
Sbjct:    1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPI 112          

HSP 2 Score: 26.5646 bits (57), Expect = 1.146e-44
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  774 PDSDGAIDGHWAKV-VSLSFA*GVPGLI*K 860
            PDS+GAIDGH  +  ++      VPG++ K
Sbjct:  124 PDSEGAIDGHLREAGLTFHLLKDVPGIVSK 153          
BLAST of EY692734 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.183e-30
Identity = 62/79 (78.48%), Postives = 64/79 (81.01%), Query Frame = 2
Query:  506 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPL 742
            MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL
Sbjct:    1 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPVPEVEKPL 79          

HSP 2 Score: 32.7278 bits (73), Expect = 1.183e-30
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 3
Query:  774 PDSDGAIDGHWAKV-VSLSFA*GVPGLI*K-YKKSLF*RSPACLTTGLIFWSS 926
            PDSDGAIDGH  +V ++      VPGLI K  +KSL   + A    G+  W+S
Sbjct:   91 PDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL---NEALKPIGISDWNS 140          
BLAST of EY692734 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.143e-20
Identity = 65/227 (28.63%), Postives = 114/227 (50.22%), Query Frame = 2
Query:    2 HASDSLRVQLEMATVQEI-RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALF 679
            H     +VQ+     Q + R + +++  + VL IG + P   ++Q    D        +   E  EK KR+ ++S IK R++ + +    EN     ++    D       V VP L ++A  +A+K+WG  K  ITH++  T++G+ +P  +++L  L+GL   V+R  +   GC AG + LR A  LA+ +   R+LVVC+E+ ++ F        D +V  ++F
Sbjct: 2759 HQKQQQKVQVIQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIF 2979          
The following BLAST results are available for this feature:
BLAST of EY692734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS2_ARAHY8.815e-6373.75Putative stilbene synthase 2 (Fragment) OS=Arachis... [more]
CHS6_MEDSA2.292e-5881.82Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHS7_MEDSA1.146e-4477.88Chalcone synthase (Fragment) OS=Medicago sativa GN... [more]
CHSY_MALDO1.183e-3078.48Chalcone synthase (Fragment) OS=Malus domestica GN... [more]
PKS1_DICDI4.143e-2028.63Probable polyketide synthase 1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-H04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692734 ID=EY692734; Name=EY692734; organism=Citrus sinensis; type=EST; length=931bp
CCACGCGTCCGATTCATTAAGGGTTCAACTTGAAATGGCAACCGTTCAAG
AGATCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATC
GGTACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTA
TTACTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGT
TCAAGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTA
ACGGAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCC
ATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCG
GGAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCT
AAGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGG
CGCCGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGC
GCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGC
CTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGT
CTGTTCGGAGATCACGGCAGTCACTTTCCGCGGGCCTGCCGATACTCATC
TTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTG
ATCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGATCANCTC
GTGTCGACTTCGCAGACAATCCTCCTGACTCTGACGGTGCAATTGACGGA
CACTGGGCGAAAGTCGTCTCACTTTCCTTTGCTTAAGGAGTCCCCGGCTT
GATCTAAAAATATAAAAAAAGCCTGTTTTAGCGTTCGCCCGCTTGCTTAA
CGACTGGACTCATATTTTGGTCGTCACCCCG
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