EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3F_ARATH (RING-H2 finger protein ATL3F OS=Arabidopsis thaliana GN=ATL3F PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVD 670
            G+D  VI+SLP+F F     HKD +ECAVCL+ FE +E  R+LP C+H FHV+C+D W  SHSTCPLCR  V+
Sbjct:   94 GLDPNVIKSLPVFTFSD-ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVE 165          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1D_ARATH (RING-H2 finger protein ATL1D OS=Arabidopsis thaliana GN=ATL1D PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +SG+D+ +I++LP+F +  ++G K+  +CAVCL  F   + LRLLP C HAFH++C+DTWL S+STCPLCR
Sbjct:  116 DSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  434 TNRKNSGIDRTVIESLPIFRFGALRG---HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPE 676
            T R + G+ + VI S P F +  ++G    K G+ECA+CL  FE  E LRL+P C HAFH  C+D WL S STCP+CR  + P+
Sbjct:   93 TRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPK 176          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALR-GHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDILLSF-EKIWTPLS 718
            +SG+D+T I++LP+F +G +    +   +CAVCL  F  T+ LRLLP C HAFH+ C+DTWL S+STCPLCR  +   ++  +  E +  PLS
Sbjct:  178 DSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHSETLVAPLS 270          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 50/128 (39.06%), Postives = 63/128 (49.22%), Query Frame = 2
Query:  290 PSMAVVVGVXXXXXXXXXXXXXYAKHCKRG--NSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDG---LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            P+MAVVV V             Y +HC      SV   G +   + N +       G+D   IE+ P F +  ++  K G   LECA+CL  FE  E LRLLPKC H FH  C+  WL  H TCP+CR
Sbjct:   43 PAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVAR----GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCR 166          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4G_ARATH (RING-H2 finger protein ATL4G OS=Arabidopsis thaliana GN=ATL4G PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  422 NPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            +PSST     G++ ++I+SLPIF F A+      +EC+VCL+ F+  E  R++P CKH FHV C+D W  SHS+CPLCR +++P
Sbjct:   44 DPSSTP---GGLNPSIIKSLPIFTFSAVTA-LFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEP 123          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            G+ R+ I S+ +  F    G  DG EC+VCL  FE  E LRLLPKC HAFH+ C+DTWL SH  CPLCR
Sbjct:  109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFG---ALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            G+D   IE+ P F +    A+R  K G+ECAVCL  FE  E LRL+P C H FH +CVD WL  HSTCPLCR
Sbjct:  106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR 177          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  284 FKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGNSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGA---LRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            F P+ A+++ V             Y + C +    +  G      +N   T     G+D +VIE+ P F +     LR  K+ LEC VCL  FE  E LRL+P+C H FH  C+D WL S +TCPLCR  + P
Sbjct:   35 FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEP--GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVP 165          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4I_ARATH (Putative RING-H2 finger protein ATL4I OS=Arabidopsis thaliana GN=ATL4I PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGA---LRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            N G++  +I S P F + +   LR  K GLECA+CL  F+   VLRLL  C H FH EC+D W +SH TCP+CR  +DP
Sbjct:   79 NPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDP 157          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL3F_ARATH1.352e-1957.53RING-H2 finger protein ATL3F OS=Arabidopsis thalia... [more]
ATL1D_ARATH1.352e-1953.52RING-H2 finger protein ATL1D OS=Arabidopsis thalia... [more]
ATL1H_ARATH1.952e-1847.62RING-H2 finger protein ATL1H OS=Arabidopsis thalia... [more]
ATL3I_ARATH3.329e-1846.24RING-H2 finger protein ATL3I OS=Arabidopsis thalia... [more]
ATL5H_ARATH4.348e-1839.06RING-H2 finger protein ATL5H OS=Arabidopsis thalia... [more]
ATL4G_ARATH1.652e-1747.62RING-H2 finger protein ATL4G OS=Arabidopsis thalia... [more]
ATL5F_ARATH2.158e-1756.52RING-H2 finger protein ATL5F OS=Arabidopsis thalia... [more]
ATL2G_ARATH2.818e-1755.56RING-H2 finger protein ATL2G OS=Arabidopsis thalia... [more]
ATL1C_ARATH2.818e-1736.09RING-H2 finger protein ATL1C OS=Arabidopsis thalia... [more]
ATL4I_ARATH4.807e-1749.37Putative RING-H2 finger protein ATL4I OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
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