EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  437 NRKNSGIDRTVIESLPIFRFGALRG---HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +R   G+++ VIES P F +  ++G    K G+ECA+CL+ FE  E LR +P C H FH  C+D WL S STCP+CR
Sbjct:   89 SRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3L_ARATH (RING-H2 finger protein ATL3L OS=Arabidopsis thaliana GN=ATL3L PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 2
Query:  404 SHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLE-CAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            S +A  +P+ ++   S +D TV+E +PIF + +++ H+  LE C+VCL+ FE  +  R+LPKC H FHV+C+DTW  S S+CPLCR  V P
Sbjct:   71 SLAAARDPTQSSSSLSPLDPTVLEKIPIFVY-SVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 43/100 (43.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  368 CKRGNSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHK---DGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            C   N   G+   HS         R   GID+ VIES P F +  ++  K    G+ECA+CL  FE  E LR +P C H FH  C+D WL S STCP+CR
Sbjct:   72 CIEENETGGHEVLHS---------RVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCR 162          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  437 NRKNSGIDRTVIESLPIFRFGALRGHKDGL-ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            N  ++ ID++ I++LP+  +  + G +  L +CAVCL  F   + LRLLPKC HAFHVEC+DTWL ++STCPLCR
Sbjct:   90 NLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5L_ARATH (Putative RING-H2 finger protein ATL5L OS=Arabidopsis thaliana GN=ATL5L PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGA---LRGHKDGLECAVCLTRFEPTEVL-RLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            N G++  +I+S P+F F +   LR  K GLECA+CL  FE   +L RLL  C H FH EC+D WL+S+ TCP+CR  +DP
Sbjct:   83 NPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDP 162          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4A_ARATH (RING-H2 finger protein ATL4A OS=Arabidopsis thaliana GN=ATL4A PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 2
Query:  356 YAKHCKRGNSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDG---LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            Y + C+  N     G    A ++P    R   G+D   I+S P F +   RG + G   LEC VCL  F+  E LRL+P C H FH +CVD WL   STCP+CR +V P
Sbjct:   29 YIRRCR--NRAAAAGDIEEARMSP---RRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKVVP 132          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2H_ARATH (RING-H2 finger protein ATL2H OS=Arabidopsis thaliana GN=ATL2H PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  431 STNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            +T  +N+G+D  +I S P+F + +      G ECA+CL+ F   + +RL+  C+H FH  C+D W + H TCP+CR  +DP
Sbjct:   70 ATPPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELDP 150          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALRGHKDG----------LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +SG+D+  I++LP+F +  + G   G           +CAVCL  F   + LRLLP C HAFH+ C+DTWL S+STCPLCR
Sbjct:  105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 2
Query:  401 TSHSALINPSSTNRKNSG------IDRT-VIESLPIFRFGALRGHKDGL---ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +S S++   +S +R+ SG       +R+ V++SLPIF+F ++      +   +CAVCL++FEP + LRLLP C HAFH +C+D WL S+ TCPLCR
Sbjct:   64 SSSSSVATVTSDSRRFSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCR 159          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4B_ARATH (Putative RING-H2 finger protein ATL4B OS=Arabidopsis thaliana GN=ATL4B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.386e-16
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  437 NRKNSGIDRTVIESLPIFRFGALRG---HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +R   G+++ ++ES PIF +  ++G    K G+ECA+CL+ F   E LR +P C H FH  C+D WL S STCP CR
Sbjct:   89 SRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL4C_ARATH4.807e-1748.05Putative RING-H2 finger protein ATL4C OS=Arabidops... [more]
ATL3L_ARATH4.807e-1746.15RING-H2 finger protein ATL3L OS=Arabidopsis thalia... [more]
ATL4D_ARATH6.278e-1743.00Putative RING-H2 finger protein ATL4D OS=Arabidops... [more]
ATL5N_ARATH1.071e-1652.00Putative RING-H2 finger protein ATL5N OS=Arabidops... [more]
ATL5L_ARATH1.399e-1650.00Putative RING-H2 finger protein ATL5L OS=Arabidops... [more]
ATL4A_ARATH1.399e-1641.28RING-H2 finger protein ATL4A OS=Arabidopsis thalia... [more]
ATL2H_ARATH1.399e-1639.51RING-H2 finger protein ATL2H OS=Arabidopsis thalia... [more]
ATL5I_ARATH1.827e-1646.91RING-H2 finger protein ATL5I OS=Arabidopsis thalia... [more]
ATL3J_ARATH1.827e-1644.79RING-H2 finger protein ATL3J OS=Arabidopsis thalia... [more]
ATL4B_ARATH2.386e-1645.45Putative RING-H2 finger protein ATL4B OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
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