EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.386e-16
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            G+D  VI SLP F  G ++    G ECAVCL+  E  +  R+LP CKH FHV CVDTWL + STCP+CR   +P
Sbjct:   75 GLDSLVIASLPTFVVG-IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEP 147          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.116e-16
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 2
Query:  443 KNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            + +G+ +++I S+ I  +    G  +  +C VCL  FE  E LRLLPKC HAFH+ C+DTWL SH+ CPLCR
Sbjct:  148 RTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2F_ARATH (RING-H2 finger protein ATL2F OS=Arabidopsis thaliana GN=ATL2F PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.315e-16
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRGHK---DGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            G+D  +I S P F +  ++  +    G+ECAVC+  FE  E LRL+P+C H FH +CV  WL  HSTCPLCR
Sbjct:   67 GLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCR 138          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.315e-16
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 2
Query:  425 PSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            P      N+G+    + SLPI  F      KDGLEC++CL+     +  RLLPKC H+FHVEC+D W  SHSTCP+CR  V
Sbjct:   93 PGQDALSNTGLTSFELSSLPIVFFRQ-DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.941e-16
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  431 STNRKNSGIDRTVIESLPIFRFGALRGHKDGL--------------ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            S   ++ G+D +VI ++PIF+F       DG+              EC+VCL+ F+  E LR++P C H FH++C+D WL +++ CPLCR RV
Sbjct:   91 SPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1M_ARATH (RING-H2 finger protein ATL1M OS=Arabidopsis thaliana GN=ATL1M PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.941e-16
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 2
Query:  377 GNSVVGYGTSHSALINPSSTNRK--NSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            G++V+G        +   S      N+G+D  +++S+ +  F      KDGLECAVCL+     +  R+LP+C H FHV+C+D W  SHSTCPLCR  V
Sbjct:   68 GSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCT-DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2N_ARATH (RING-H2 finger protein ATL2N OS=Arabidopsis thaliana GN=ATL2N PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.066e-16
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  431 STNRKNSGIDRTVIESLPIFRFGALRGH--KDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            S + ++  +D+ V++ +PIF + +      ++  EC+VCL+ FE  +  RLLPKC H+FHV+C+DTW  S STCPLCR  V P
Sbjct:   73 SASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQP 155          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.184e-15
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 2
Query:  422 NPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGL-----ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            +P +     +G+D T+I+ +  F+   L+ H++G      +C++CL  F   E LRLLPKC H FHV C+D WL SHS CPLCR ++
Sbjct:  143 DPFALESSTAGLDDTLIKKIGFFK---LKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKI 226          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2L_ARATH (RING-H2 finger protein ATL2L OS=Arabidopsis thaliana GN=ATL2L PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.184e-15
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRG-HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            G++ TVI SLP F  GA  G      ECAVCL+  +  +  R LP CKH FHV+CVDTWL + STCP+CR  V+P
Sbjct:   81 GLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEP 155          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: EL5_ORYSJ (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.499e-15
Identity = 42/82 (51.22%), Postives = 47/82 (57.32%), Query Frame = 2
Query:  452 GIDRTVIESLPIF---RFGALRGHK-------DGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            G+D  V+ SLP+    R  A    K       DG+ECAVCL   E  E  R LP+C H FH ECVD WL SHSTCPLCR  V
Sbjct:   98 GVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 179          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL2K_ARATH2.386e-1652.70RING-H2 finger protein ATL2K OS=Arabidopsis thalia... [more]
ATL1O_ARATH3.116e-1648.61RING-H2 finger protein ATL1O OS=Arabidopsis thalia... [more]
ATL2F_ARATH5.315e-1648.61RING-H2 finger protein ATL2F OS=Arabidopsis thalia... [more]
ATL1P_ARATH5.315e-1648.15RING-H2 finger protein ATL1P OS=Arabidopsis thalia... [more]
ATL5K_ARATH6.941e-1638.71RING-H2 finger protein ATL5K OS=Arabidopsis thalia... [more]
ATL1M_ARATH6.941e-1640.40RING-H2 finger protein ATL1M OS=Arabidopsis thalia... [more]
ATL2N_ARATH9.066e-1644.58RING-H2 finger protein ATL2N OS=Arabidopsis thalia... [more]
ATL4H_ARATH1.184e-1542.53Putative RING-H2 finger protein ATL4H OS=Arabidops... [more]
ATL2L_ARATH1.184e-1553.33RING-H2 finger protein ATL2L OS=Arabidopsis thalia... [more]
EL5_ORYSJ4.499e-1551.22E3 ubiquitin-protein ligase EL5 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
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