EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.499e-15
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 2
Query:  431 STNRKNSGIDRTVIESLPIFRF-------GALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPE 676
            S +  N G+D + I ++P+F+F       G     K+  EC+VCL  F+  E LR++P C H FH++C+D WL  ++ CPLCR  V  E
Sbjct:   94 SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCE 182          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.309e-14
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 2
Query:  410 SALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPED 679
            S LI PS+   +N G+D  +IES P + +       D  +C++CLT F   + +RL+  C H+FH  C+D W + H TCP+CR  +D ED
Sbjct:  117 SNLIQPSNPP-ENLGLDSKIIESFPEYPYSVKDHGTD--QCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVED 203          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 2
Query:  422 NPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGL-ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +P      N G+ + V+ SLP   +       + L ECA+CLT F   + LR+LP+C H FHV C+DTWL SHS+CP CR
Sbjct:   67 HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3E_ARATH (Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  428 SSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667
            S T ++  GI   V+ S+PI  F   +  K  LEC VCL+     +  R+LP C H FHVEC+D+WL S+STCP+CR RV
Sbjct:   55 SITIKERVGIKPYVLRSIPIVDFNT-KDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRV 133          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            G+D   + SLP++R+      ++  +C +CL+ FE  E ++++P C H FHV+CVDTWL S+ TCPLCR
Sbjct:  115 GLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCR 182          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALRGHKDGL-ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            N G+ + V++SLP   F       +   ECA+CL  F   + LR+LP+C H FHV C+DTWL SHS+CP CR
Sbjct:   82 NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 2
Query:  392 GYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRY 661
            G+G S SA    + T    +G+ +  ++  P+  +G+        ECA+CL  F   E +R+LP C H+FH+ C+DTWL SHS+CP CR+
Sbjct:   62 GFGLSSSAA---AGTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRH 148          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5O_ARATH (RING-H2 finger protein ATL5O OS=Arabidopsis thaliana GN=ATL5O PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  422 NPSST-NRKNSGIDRTVIESLPIFRFGALRGHKDGLE-CAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV-----DPEDILLSFEKI 703
            +P++T  R + G+D +VI S+P+F +      +D  E C +CL  +E  +  R L  C H FHVEC+D WL SHSTCPLCR  V     D E++ L+   +
Sbjct:  100 SPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAV 200          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRF-------GALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            N G+ +  ++SLP   F       GA     D  ECA+CLT F   E +R+LP C H+FHVEC+D WL S S+CP CR  + P
Sbjct:   67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTP 149          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3H_ARATH (Putative RING-H2 finger protein ATL3H OS=Arabidopsis thaliana GN=ATL3H PE=5 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 2
Query:  416 LINPSSTNR--KNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVD 670
            LI+PS +    K +GI+ +V+ S+P+  F A    KD +EC VCL++F   +  R+LP C H FH +  DTWL S  TCP CR  V+
Sbjct:   40 LIHPSHSLHVIKATGINPSVLLSIPVVSFNA-NAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRKNVE 125          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL1A_ARATH4.499e-1539.33RING-H2 finger protein ATL1A OS=Arabidopsis thalia... [more]
ATL1F_ARATH1.309e-1440.00RING-H2 finger protein ATL1F OS=Arabidopsis thalia... [more]
ATL1R_ARATH2.233e-1445.00RING-H2 finger protein ATL1R OS=Arabidopsis thalia... [more]
ATL3E_ARATH2.916e-1447.50Putative RING-H2 finger protein ATL3E OS=Arabidops... [more]
ATL2E_ARATH2.916e-1444.93RING-H2 finger protein ATL2E OS=Arabidopsis thalia... [more]
ATL1B_ARATH3.809e-1447.22RING-H2 finger protein ATL1B OS=Arabidopsis thalia... [more]
ATL5A_ARATH4.974e-1438.89RING-H2 finger protein ATL5A OS=Arabidopsis thalia... [more]
ATL5O_ARATH8.485e-1440.59RING-H2 finger protein ATL5O OS=Arabidopsis thalia... [more]
ATL2A_ARATH8.485e-1444.58RING-H2 finger protein ATL2A OS=Arabidopsis thalia... [more]
ATL3H_ARATH1.447e-1343.68Putative RING-H2 finger protein ATL3H OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
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