EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.224e-13
Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 2
Query:  452 GIDRTVIESLPIFRFGALR----------GHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDILLSFEKIWTPLS 718
            G+D +VI++LP+F + A               +  +CAVCL  FE  + +R LP C HAFH+EC+D WL SH  CPLCR        +L    + TP+S
Sbjct:  120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCR------TAILGSAGVLTPMS 212          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1G_ARATH (RING-H2 finger protein ATL1G OS=Arabidopsis thaliana GN=ATL1G PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.224e-13
Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 2
Query:  356 YAKHCKRGNSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            Y  + +R +S +      +  I  +S +    G+ + + E LPI  F       D  +C+VCL  ++P + L+ +P CKH FH++C+D WL SH+TCPLCR  + P
Sbjct:   43 YLIYLRRSSSDLSSLGMRTTFIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDS-QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIP 147          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5E_ARATH (Putative RING-H2 finger protein ATL5E OS=Arabidopsis thaliana GN=ATL5E PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 2
Query:  401 TSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRG--HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDILLSFEKIWTPLS 718
            TS   L  PS       G+DR VIES P    G  R     +   C++CL  +E  E +R +P+C H FH +CVD WL + +TCPLCR    P        ++ TPLS
Sbjct:   49 TSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAP-------SRLATPLS 149          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 2
Query:  410 SALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKD-GLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRY 661
            S+L  P S++  N GI +  +   P+  +         G EC +CL+ F   E LRLLPKC H FHV C+D WL  H TCP CR+
Sbjct:   96 SSLSTPRSSS--NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRH 178          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2
Query:  401 TSHSALINPSSTNRK------NSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            TS   + N S+ N         +G+ +  ++ +P+  +G+        EC +CL  FE  E +R+LPKC H FHV C+DTWL S S+CP CR
Sbjct:   65 TSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2I_ARATH (RING-H2 finger protein ATL2I OS=Arabidopsis thaliana GN=ATL2I PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12
Identity = 46/176 (26.14%), Postives = 72/176 (40.91%), Query Frame = 2
Query:  179 LADNHDSRTTNNNSLCPPPF-IQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGNSVVGYGTSHSALINPSSTNRKNS---------------GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +  NH ++   NN   PPP  + D        +   F+  + V +GV                          Y T +    +PS TN+ ++               G+D   I+S P   +   +G      CA+CL  ++   +LR LP C H FH++C+DTWL  + TCP+CR
Sbjct:   28 IKQNHQTKPAMNNFQPPPPSEMPDYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSY--------------YCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVVPGLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12
Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 2
Query:  428 SSTNRKNSGIDRTVIESLPIFRFGALRGHKDGL--ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            S+    N GI +  +   P+  +     +  GL  EC +CL+ F   E LRLLPKC H FHV C+D WL  H TCP CR
Sbjct:  100 STRGSSNKGIKKKALRMFPVVSYSP-EMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  425 PSSTNRKNS--GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDIL 685
            P++ N   +  G+ + + E LP+  +      KD  +C+VCL  ++  E L+ +P C H FH+EC+D WL SH+TCPLCR  + P+  L
Sbjct:   75 PTNNNLSTAELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSL 162          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 2
Query:  422 NPSSTNRKNS-GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +P  TN   + GI +  ++ +P+  +      K   EC +CL  F   E +R+LPKC H FHV+C+DTWL SHS+CP CR
Sbjct:   77 DPVDTNANVAKGIKKRALKVIPVDSYSPELKMK-ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALRGHKD-GLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRY 661
            N GI++  +   P+  +         G EC +CL+ F   E +R+LPKC H FHV C+D WL  H TCP CR+
Sbjct:  107 NKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRH 179          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL3G_ARATH3.224e-1339.39RING-H2 finger protein ATL3G OS=Arabidopsis thalia... [more]
ATL1G_ARATH3.224e-1334.91RING-H2 finger protein ATL1G OS=Arabidopsis thalia... [more]
ATL5E_ARATH4.211e-1338.89Putative RING-H2 finger protein ATL5E OS=Arabidops... [more]
ATL1J_ARATH4.211e-1342.35RING-H2 finger protein ATL1J OS=Arabidopsis thalia... [more]
ATL3C_ARATH7.183e-1338.04RING-H2 finger protein ATL3C OS=Arabidopsis thalia... [more]
ATL2I_ARATH1.600e-1226.14RING-H2 finger protein ATL2I OS=Arabidopsis thalia... [more]
ATL1K_ARATH2.090e-1243.04RING-H2 finger protein ATL1K OS=Arabidopsis thalia... [more]
ATL4E_ARATH2.730e-1238.20RING-H2 finger protein ATL4E OS=Arabidopsis thalia... [more]
ATL5B_ARATH3.565e-1242.50RING-H2 finger protein ATL5B OS=Arabidopsis thalia... [more]
ATL1I_ARATH3.565e-1241.10RING-H2 finger protein ATL1I OS=Arabidopsis thalia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
back to top