EY692726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + K G+ + IE LP +RF + C VC + FE ++LR+LP C H FH +CVD WL ++ TCP+CR Sbjct: 352 NYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWLKTNRTCPICR 437
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF38_MOUSE (RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + K G+ + IE LP +RF + C VC+ FE ++LR+LP C H FH +CVD WL + TCP+CR Sbjct: 422 NYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 507
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF38_HUMAN (RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + K G+ + IE LP +RF + C VC+ FE ++LR+LP C H FH +CVD WL ++ TCP+CR Sbjct: 419 NYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 504
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3D_ARATH (RING-H2 finger protein ATL3D OS=Arabidopsis thaliana GN=ATL3D PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 2 Query: 434 TNRKNSGIDRTVIESLPIFRFGALRGHKDG-LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRV 667 T ++ G+D I SLP+ R ++ EC +CL FE E +++LP C H +H ECVD WL + S+CPLCR + Sbjct: 74 TRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + + K G+ + IE LP +RF + C VC + FE ++LR+LP C H FH +CVD WL ++ TCP+CR Sbjct: 336 NYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 421
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 446 NSGIDRTVIESLPIFRFGALRGHKDGL--ECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRY 661 N+G+ R ++S + + GL ECA+CL+ F E ++LLP C H FHV C+D WL SHS+CP CR+ Sbjct: 102 NTGVKRKALKSFQTVSYST-ELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH 174
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1E_ARATH (RING-H2 finger protein ATL1E OS=Arabidopsis thaliana GN=ATL1E PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 449 SGIDRTVIESLPIFRFGALRG--HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 +G+D++ IES G R +G+ C +CL+ + E +R +P+C H FHV+C+D WL HS+CP+CR Sbjct: 224 TGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12 Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + + K G+ + IE LP +RF + C VC + FE ++LR+LP C H FH +CVD WL ++ TCP+CR Sbjct: 254 NYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 339
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: RNF44_MOUSE (RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12 Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 404 SHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658 ++ AL+N + + K G+ + IE LP +RF + C VC + FE ++LR+LP C H FH +CVD WL ++ TCP+CR Sbjct: 311 NYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 396
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 425 PSSTNRKNS--GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPE 676 P++ N + G+ + + E LPI + D +C+VCL ++ E L+ +P C H FH+EC+D WL SH+TCPLCR + P+ Sbjct: 61 PTNNNLSTAELGLSKDIREMLPIVIYKESFTVND-TQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPK 145 The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bpback to top |