EY692657

Overview
NameEY692657
Unique NameEY692657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.145e-46
Identity = 92/189 (48.68%), Postives = 125/189 (66.14%), Query Frame = 2
Query:  209 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-----NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALV-GLGLLDPXQKMASCGCDILXRVW 757
            +GH+D +HD  MD+YG+RLAT SSD +IKI  L   + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +      + W++   F+ H +SVN ++WAPHELG  LAC SSDG++SV     D  W T +I  AH +GV SVSWAP  APG+++         ++  + G D L ++W
Sbjct:    8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIW 194          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.620e-46
Identity = 94/190 (49.47%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVG--LGLLDPXQKMASCGCDILXRVWR 760
            I   HED +HD  +D+YGKRLAT SSD +IKI  +  + +  L ATL GH GP+WQVAWAHPKFGSILASCSYDG+V+IWKE  +   W+       H++SVNS++WAPHELG  L C SSDG +SV     DG       D AH +GV S SWAP  A  +        L   ++  +CG D L ++W+
Sbjct:    4 IGNAHEDLIHDAVLDYYGKRLATCSSDKTIKIYDIEGTENYKLTATLTGHEGPIWQVAWAHPKFGSILASCSYDGKVLIWKEQQDTQQWSIIAEHTIHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFD-AHAIGVNSASWAPFTAASSTSSKDANTLKQHRRFVTCGSDNLVKIWK 192          

HSP 2 Score: 21.9422 bits (45), Expect = 1.620e-46
Identity = 7/13 (53.85%), Postives = 9/13 (69.23%), Query Frame = 3
Query:  807 HX*WVXSVAWAPN 845
            H  WV  VAW+P+
Sbjct:  209 HTDWVRDVAWSPS 221          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 2.754e-46
Identity = 91/186 (48.92%), Postives = 117/186 (62.90%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            I   H+D +HD  +D+YG+RLAT SSD +IKI  +     + + TL GH GPVWQVAWAHPKFG ILASCSYDG+V+IWKE N   W +    + H++SVNS++WAPHE G  L C SSDG IS+     DGG     + Q H +GV + SWAP         + L D  ++  S GCD L ++WR
Sbjct:    4 IGNAHDDLIHDAVLDYYGRRLATCSSDKTIKIFEIDGENQRLVETLIGHEGPVWQVAWAHPKFGVILASCSYDGKVLIWKEDN-GVWNKVAEHSVHQASVNSVSWAPHEYGPVLLCASSDGKISI-VEFKDGGALEPIVIQGHAIGVNAASWAP---------ISLPDNTRRFVSGGCDNLVKIWR 178          

HSP 2 Score: 22.7126 bits (47), Expect = 2.754e-46
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P+ + +  IA
Sbjct:  195 HSDWVRDVAWSPSRLSKSYIA 215          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.690e-46
Identity = 91/186 (48.92%), Postives = 116/186 (62.37%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVW 757
            I   H++ +HD  +D+YGKRLAT SSD +IKI  +  + +  L  TL GH GPVWQVAWAHPKFGSILASCSYDG+V++WKE     W+       H++SVNS++WAPHELG  L C SSDG +SV     D G  T  I +AH +GV S SWAP         +    P ++  + G D L +VW
Sbjct:    4 IANAHDELIHDAVLDYYGKRLATCSSDKTIKIFEVEGTENYQLTETLVGHEGPVWQVAWAHPKFGSILASCSYDGKVLVWKESPDRSWSIISEHKVHQASVNSVSWAPHELGAVLLCTSSDGRVSVVDFN-DDGTSTHIIFEAHKIGVNSASWAP---------VDTKSPVRRFVTGGSDNLAKVW 179          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 89/187 (47.59%), Postives = 120/187 (64.17%), Query Frame = 2
Query:  209 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALV----GLGLLDPXQKMASCGCDILXRVW 757
            +GH+D +HD  +D+YG+RLAT SSD +IKI  +   + + + TLKGH G VW VAWAHPK+G+ILAS  YDG+V+IW+E     W +   F  HK+SVN ++W+PHE G  LAC SSDGN+SV     D  W+   I  AH +GV SVSWAP   PG++V    G G     ++  + G D L ++W
Sbjct:   11 SGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNILASAGYDGKVLIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVL-EFKDNSWE-HNIFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTG-NRRFVTGGSDNLLKIW 193          

HSP 2 Score: 22.3274 bits (46), Expect = 1.462e-44
Identity = 9/21 (42.86%), Postives = 12/21 (57.14%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P  + +  IA
Sbjct:  212 HTDWVRDVAWSPTVLQKSYIA 232          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.906e-44
Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            I   H+D +HD  +D+YGKRLAT SSD +IKI  L  + +  L  TL GH GPVWQV+WAHPKFGSILASCSYDG+ +IWKE  +   W+       H++SVNS++WAPHELG  L C SSDG +SV     DG       D AH +G  S +WAP     +      L   +++ SCG D L ++W+
Sbjct:    4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFD-AHAIGANSATWAP--VSTSSKDSAALKQQRRIVSCGSDNLAKIWK 188          

HSP 2 Score: 22.3274 bits (46), Expect = 1.906e-44
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P+ + +  IA
Sbjct:  205 HTDWVRDVAWSPSNLIRSYIA 225          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.497e-44
Identity = 88/184 (47.83%), Postives = 114/184 (61.96%), Query Frame = 2
Query:  215 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVG--LGLLDPXQKMASCGCDILXRVWR 760
            H+D +HD  +D+YGKRLAT SSD +IKI  +     + + TL+GH GPVWQV+WAHPKFGSI+AS SYDG+V IW+E N   WT     + H +SVNS+ WAP E G  L C SSDGN+SV      G  + T    AH VG  S SWAP    G+L+    G      ++ + GCD L ++W+
Sbjct:    8 HDDLIHDAVLDYYGKRLATCSSDKTIKIFEIDGDNHKLVETLRGHEGPVWQVSWAHPKFGSIIASASYDGKVFIWREEN-GRWTNI-AQHQHNASVNSVVWAPQEYGPLLLCASSDGNVSVVEFKEGGNCEATTF-AAHDVGANSASWAPPAVSGSLIQPINGKASNNIRIVTGGCDNLVKIWK 188          

HSP 2 Score: 23.0978 bits (48), Expect = 5.497e-44
Identity = 13/39 (33.33%), Postives = 19/39 (48.72%), Query Frame = 3
Query:  801 SXHX*WVXSVAWAPNWVXQITIAVHHRWDVVFDLCQEGS 917
            S H  WV  VAW+ + + +  IA   +   V    QEG+
Sbjct:  203 SGHKDWVRDVAWSSSVLSKSYIASASQDKTVIVWTQEGN 241          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 7.162e-44
Identity = 89/190 (46.84%), Postives = 116/190 (61.05%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGA--LVGLGLLDPXQKMASCGCDILXRVWR 760
            I   H D +HD  +D+YGKRLAT SSD SI I  +  + S  L +TL GH GPVWQV+WAHPKFGSILASCS+DG+ +IWKE  +   W+     + H++SVNS++WAPHELG  L C SSDG +SV     DG       D AH +G  S SWAP  +  +        L   ++  +CG D L ++W+
Sbjct:    4 IGNAHNDLIHDAVLDYYGKRLATCSSDKSINIFDIDGTESYKLVSTLTGHDGPVWQVSWAHPKFGSILASCSFDGKALIWKEQPETQQWSIIAEHSVHQASVNSVSWAPHELGAVLLCASSDGKVSVVDFNDDGTTSHVVFD-AHAIGANSASWAPLSSTPSPNQKDAASLKQQRRFVTCGSDNLAKIWK 192          

HSP 2 Score: 23.8682 bits (50), Expect = 7.162e-44
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P+ + +  IA
Sbjct:  209 HTDWVRDVAWSPSMLVRTYIA 229          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.331e-44
Identity = 90/186 (48.39%), Postives = 119/186 (63.98%), Query Frame = 2
Query:  230 HDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQ--KMASCGCDILXRVW 757
            HD  +D+YG+RLAT SSD +IKI  +     + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN         WT+   F+ H +SVN ++WAPHE G  LAC SSDG++SV     D  W T +I  AH +GV S+SWAP  +PG+L+      P Q  +  + G D L ++W
Sbjct:   14 HDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAPAASPGSLISSN-PGPGQQRRFVTGGSDNLLKIW 196          

HSP 2 Score: 22.7126 bits (47), Expect = 9.331e-44
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P+ + +  IA
Sbjct:  214 HSDWVRDVAWSPSILSKSYIA 234          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEC13_ASPOR (Protein transport protein sec13 OS=Aspergillus oryzae GN=sec13 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.336e-44
Identity = 89/187 (47.59%), Postives = 120/187 (64.17%), Query Frame = 2
Query:  227 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ--------NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQ--KMASCGCDILXRVW 757
            +HD  +D+YG+RLAT SSD +IKI  +     + + TLKGH G VW +AWAHPKFG+ILAS SYDG+V+IW+E +Q        N WT+   F+ H +SVN ++WAPHE G  LAC SSDG++SV     D  W T +I  AH +GV S+SWAP  +PG+L+      P Q  +  + G D L ++W
Sbjct:    1 MHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLVETLKGHEGAVWCIAWAHPKFGTILASSSYDGKVLIWREQHQNTTSPVAVNTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFQDNSW-THQIFHAHGMGVNSISWAPAASPGSLISAN-PGPGQQRRFVTGGSDNLLKIW 184          

HSP 2 Score: 22.7126 bits (47), Expect = 9.336e-44
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  807 HX*WVXSVAWAPNWVXQITIA 869
            H  WV  VAW+P+ + +  IA
Sbjct:  202 HSDWVRDVAWSPSILSKSYIA 222          
The following BLAST results are available for this feature:
BLAST of EY692657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
SEC13_COCIM1.145e-4648.68Protein transport protein SEC13 OS=Coccidioides im... [more]
SEC13_LODEL1.620e-4649.47Protein transport protein SEC13 OS=Lodderomyces el... [more]
SEC13_PICPG2.754e-4648.92Protein transport protein SEC13 OS=Pichia pastoris... [more]
SEC13_PICGU9.690e-4648.92Protein transport protein SEC13 OS=Pichia guillier... [more]
SEC13_NEUCR1.462e-4447.59Protein transport protein sec-13 OS=Neurospora cra... [more]
SEC13_CANAL1.906e-4447.87Protein transport protein SEC13 OS=Candida albican... [more]
SEC13_YARLI5.497e-4447.83Protein transport protein SEC13 OS=Yarrowia lipoly... [more]
SEC13_PICST7.162e-4446.84Protein transport protein SEC13 OS=Pichia stipitis... [more]
SEC13_ASPFU9.331e-4448.39Protein transport protein sec13 OS=Aspergillus fum... [more]
SEC13_ASPOR9.336e-4447.59Protein transport protein sec13 OS=Aspergillus ory... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692657 ID=EY692657; Name=EY692657; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGCCACCACGCAAAAAGCCTAAAAACGTTTATTACTCTCAG
CCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCTCTCTTAAGAAATTTGG
AGCTGAGAACATAAGATAAAAAGGAGCTACGAACTAGTGATCAAGGAGTT
GAAGTTTGAGGGGTAAAATAAAGAAATATAAAGTAAGATGCCTGCACAAA
AAATTGAAACTGGTCATGAAGACACTGTCCATGATGTAGCCATGGATTTC
TATGGAAAACGTTTAGCCACAGCTTCGTCTGACTCCAGCATTAAGATAAT
TGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCTACATTGAAAGGCCATA
GAGGTCCTGTTTGGCAAGTTGCATGGGCACACCCCAAGTTTGGGTCAATC
CTTGCTTCCTGTTCCTATGATGGCCAAGTTATTATCTGGAAGGAAGGTAA
TCAAAATGATTGGACACAGGCTCATACTTTTAATGATCATAAATCATCTG
TCAACTCCATTGCGTGGGCACCTCATGAACTTGGTCTCTCCTTGGCTTGT
GGATCTTCTGATGGGAACATCTCAGTCTTTACTGCTACAGCTGATGGTGG
CTGGGATACTACCAGGATAGACCAGGCCCATCCAGTCGGAGTAACATCTG
TTTCATGGGCCCCGGGCATGGCTCCTGGTGCTTTAGTTGGATTGGGCTTA
CTGGATCCTNGTCAGAAAATGGCTTCTTGTGGTTGTGATATACTGNTAAG
GGTGTGGAGATGTATAATGGGATTTGGAAGATGGGATGCTTCCCTGCCCT
TCANANCACANNTGATGGGTGCNGAGCGTGGCATGGGCACCAAACTGGGT
CTTNCAAATCACAATTGCAGTGCATCACAGATGGGACGTTGTATTTGACC
TGTGCCAGGAAGGGAGCATGGAGGT
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