EY692657

Overview
NameEY692657
Unique NameEY692657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.274e-21
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  197 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 586
            Q  ++GH+D VHDV  DFYG+ +AT SSD  IK+  L    S  +   + + H   +  + WA P++G I+AS SYD  V +W+E    +      W +  T ND K S+ S+ +AP  LGL LAC  +DG + ++ A
Sbjct:    2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 139          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: SEH1_SCHPO (Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=seh1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.011e-18
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  194 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG--PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG 598
            A  I+T H+D V+DV  DFYG+R+ + S+D  +K+   ++       T +   G   + +VAWAHP FG +LA CS D  V I++E  +N     W +     D +S+V  I++ P + G  LA  S+D  + ++ A   G
Sbjct:    6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPG 146          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 58/187 (31.02%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH  T+ DVA    G+ LA+AS D+++ I    +   +  ATL+GH   V  V+W+  K GS+LA+CS D  V +W+   ++++  A   N H   V  + W PHE    LA  S D  I ++    AD  W +     +H   V S+S+          G G      ++ASC  D   ++W+
Sbjct:   55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHE--DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFD---------GSG-----NRLASCSDDQTVKIWQ 223          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_CULQU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Culex quinquefasciatus GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.045e-15
Identity = 58/192 (30.21%), Postives = 93/192 (48.44%), Query Frame = 2
Query:  188 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +P   +  GH  T+ DVA    G+ LA+AS D+++ I    +   +  ATL+GH   V  V+W+  K G++LA+CS D  V IW+   ++++  A   N H   V  + W P+E    LA  S D  I ++    AD  W +     +H   V S+++    A G+           ++ASC  D   R+W+
Sbjct:   50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNE--DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFD---ASGS-----------RLASCSDDQTVRIWQ 223          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15
Identity = 55/187 (29.41%), Postives = 86/187 (45.99%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  K G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F  +A D  WD T    +H    TS  W+          +      +++ SC  D   ++WR
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKEILASASYDNTIKMFAESALDSDWDCTATLSSH----TSTVWS----------IDFDADGERLVSCSDDTTLKIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.040e-15
Identity = 60/187 (32.09%), Postives = 85/187 (45.45%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            ++ GH+ TV  VA    G  LA+AS D++  I    N   + L  L+GH   V  VAWA    G++LA+CS D  V IW+   +N++      N H   V  + W P  EL   LA  S D N+ V+    D  W+     + H    TS  W          GL      Q++ASC  D   ++W+
Sbjct:   56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQEL---LASCSYDNNVCVY-KEEDDDWECRATLEGH----TSTVW----------GLTFDPSGQRLASCSDDCTVKIWK 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 54/187 (28.88%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W          G+      +++ SC  D   ++WR
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW----------GIDFDADGERLVSCSDDTTIKIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 54/187 (28.88%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W          G+      +++ SC  D   ++WR
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW----------GIDFDADGERLVSCSDDTTIKIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.971e-14
Identity = 53/187 (28.34%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++     D  WD T    +H    TS  W          G+      +++ SC  D   ++WR
Sbjct:   54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSH----TSTIW----------GIDFDADGERLVSCSDDTTVKIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 53/187 (28.34%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W          G+      +++ SC  D   ++W+
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW----------GIDFDADGERLVSCSDDTTIKIWK 222          
The following BLAST results are available for this feature:
BLAST of EY692657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
SEH1_YEAST1.274e-2138.41Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SE... [more]
SEH1_SCHPO5.011e-1834.04Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=s... [more]
CIAO1_AEDAE2.750e-1631.02Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_CULQU1.045e-1530.21Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROWI2.328e-1529.41Probable cytosolic iron-sulfur protein assembly pr... [more]
CIO1B_SALSA3.040e-1532.09Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSE1.509e-1428.88Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROME1.509e-1428.88Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROYA1.971e-1428.34Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSI3.362e-1428.34Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692657 ID=EY692657; Name=EY692657; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGCCACCACGCAAAAAGCCTAAAAACGTTTATTACTCTCAG
CCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCTCTCTTAAGAAATTTGG
AGCTGAGAACATAAGATAAAAAGGAGCTACGAACTAGTGATCAAGGAGTT
GAAGTTTGAGGGGTAAAATAAAGAAATATAAAGTAAGATGCCTGCACAAA
AAATTGAAACTGGTCATGAAGACACTGTCCATGATGTAGCCATGGATTTC
TATGGAAAACGTTTAGCCACAGCTTCGTCTGACTCCAGCATTAAGATAAT
TGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCTACATTGAAAGGCCATA
GAGGTCCTGTTTGGCAAGTTGCATGGGCACACCCCAAGTTTGGGTCAATC
CTTGCTTCCTGTTCCTATGATGGCCAAGTTATTATCTGGAAGGAAGGTAA
TCAAAATGATTGGACACAGGCTCATACTTTTAATGATCATAAATCATCTG
TCAACTCCATTGCGTGGGCACCTCATGAACTTGGTCTCTCCTTGGCTTGT
GGATCTTCTGATGGGAACATCTCAGTCTTTACTGCTACAGCTGATGGTGG
CTGGGATACTACCAGGATAGACCAGGCCCATCCAGTCGGAGTAACATCTG
TTTCATGGGCCCCGGGCATGGCTCCTGGTGCTTTAGTTGGATTGGGCTTA
CTGGATCCTNGTCAGAAAATGGCTTCTTGTGGTTGTGATATACTGNTAAG
GGTGTGGAGATGTATAATGGGATTTGGAAGATGGGATGCTTCCCTGCCCT
TCANANCACANNTGATGGGTGCNGAGCGTGGCATGGGCACCAAACTGGGT
CTTNCAAATCACAATTGCAGTGCATCACAGATGGGACGTTGTATTTGACC
TGTGCCAGGAAGGGAGCATGGAGGT
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