EY692657

Overview
NameEY692657
Unique NameEY692657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_BOVIN (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Bos taurus GN=CIAO1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13
Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 2
Query:  212 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            GH+ TV  VA    G  LA+AS D++  I   +    + + TL+GH   V  VAWA    G++LA+CS D  V +W+   ++++      N H   V  + W P +    LA  S D  + ++    D  W      + H   V S+++ P                Q++ASC  D   R+WR
Sbjct:   59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWA--PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYREEED-DWVCCATLEGHESTVWSLAFDPS--------------GQRLASCSDDRTVRIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_MOUSE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13
Identity = 52/186 (27.96%), Postives = 83/186 (44.62%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ TV  VA    G  LA+AS D++  I   +    + + TL+GH   V  VAWA    G++LA+CS D  V +W+   ++++      + H   V  + W P +    LA  S D  + ++    D  W      + H   V S+++ P                Q++ASC  D   R+WR
Sbjct:   56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA--PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYQEEGD-DWVCCATLEGHESTVWSIAFDPS--------------GQRLASCSDDRTVRIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DROGR (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.846e-13
Identity = 54/187 (28.88%), Postives = 85/187 (45.45%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+    G +LA+CS D  V IW+    +++  A   N H   V  + W P +    LA  S D  I ++  +A D  WD T    +H    TS  W+          +      +++ SC  D   ++WR
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECNATLEGHENEVKSVSWSQS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK--EILASASYDNTIKMYAESALDSDWDCTATLSSH----TSTVWS----------IDFEADGERLVSCSDDTTLKIWR 218          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_XENTR (Probable cytosolic iron-sulfur protein assembly protein ciao1 OS=Xenopus tropicalis GN=ciao1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 52/183 (28.42%), Postives = 81/183 (44.26%), Query Frame = 2
Query:  212 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            GH+ TV  V+    G  LA+AS D++  I        + + TL+GH   V  VAWA    GS+LA+CS D  V +W+   + ++      N H   V  + W P++    LA  S D ++ ++    D  W      + H    TS  W+          L      +++A+C  D   R+WR
Sbjct:   59 GHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPS--GSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQ--ELLASASYDDSVKLYREEED-DWVCCATLEGH----TSTVWS----------LAFDQTGEQLATCSDDKTVRIWR 222          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_ANOGA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2
Query:  167 NKEI*SKMPAQKIET-GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK----EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSW-APGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            NK    +  AQ + T GH  T+ ++A    G  LA+AS D+++ +    +   +  ATL+GH   V  V W+  + G++LA+CS D  V IW+       ++++      N H   V  + W P E    LA  S D  I ++    AD  W+     ++H   V S+S+ A G               Q++ASC  D   +VW+
Sbjct:   42 NKSDTDRWVAQTVLTDGHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS--RSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE--DLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATG---------------QRLASCSEDTTVKVWQ 227          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_DICDI (Probable cytosolic iron-sulfur protein assembly protein OS=Dictyostelium discoideum GN=ciao1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 55/185 (29.73%), Postives = 78/185 (42.16%), Query Frame = 2
Query:  212 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ--HLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            GHE TV  VA    G+ LA AS D+S  I   S    +  H+++L+GH   V  VAW     G++LA+CS D  + IW+  + ND+      + H   +  + W P+E    L   SS  +   F    DG W+       H   +    W           L       K+ SCG D L   W+
Sbjct:   67 GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW--DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNE---ELLASSSYDDTIKFWKDIDGDWECINTLTGHESSI----W----------DLAFNKDGDKLVSCGEDKLVLFWK 232          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_TRIAD (Probable cytosolic iron-sulfur protein assembly protein OS=Trichoplax adhaerens GN=TRIADDRAFT_20668 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 52/186 (27.96%), Postives = 81/186 (43.55%), Query Frame = 2
Query:  212 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN-DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWRCI 766
            GH  T+  VA    G  LA+ S D++I I    +   + +ATL+GH   V  V W+    G  LASCS D    IW+   ++ ++  A    DH   V  + W+P E   +L   S D  I ++    D  W+ +       +G  S  W+          L      +   SCG D + ++W+C+
Sbjct:   43 GHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWS--SSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKE--NALVSASYDNTIKIY-KEVDDDWECSHT----LIGHESTVWS----------LSFHSSGELFVSCGDDKVLKIWKCL 209          
BLAST of EY692657 vs. ExPASy Swiss-Prot
Match: CIAO1_IXOSC (Probable cytosolic iron-sulfur protein assembly protein OS=Ixodes scapularis GN=ISCW023049 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 53/182 (29.12%), Postives = 72/182 (39.56%), Query Frame = 2
Query:  212 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVW 757
            GH+ TV  V+    G+ LA++S D +  I    +   +  ATL+GH   V    W+    G  LA+CS D  V IW+ G   ++  A     H   V  + W P      LA  S D  I  F    D  W        H   V  +S+ PG             P  ++ASC  D    VW
Sbjct:   56 GHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWS--PSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDR--DELASASYDNTIRFFCEEVD-DWQCYCTLDKHASTVWGLSFGPG-------------PEPQLASCAADGSVYVW 219          

HSP 2 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 59/191 (30.89%), Postives = 83/191 (43.46%), Query Frame = 2
Query:  203 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTR----IDQAHPVGVTSVSWAPGMAPGALVGLGLLDPXQKMASCGCDILXRVWR 760
            ++T H   V  V        LA+AS D++I+         Q   TL  H   VW +++  P     LASC+ DG V +W  +G++  W    T   H   V  ++W      L+ ACG  D  + VF    DGG  + R    + QAH   V SVSW+P    G L           +AS G D   R+W+
Sbjct:  142 VQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFG-PGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACG--DNAVRVF--VKDGGDCSWRLGCTLTQAHSQDVNSVSWSPS---GGL-----------LASAGDDGYVRLWQ 313          
The following BLAST results are available for this feature:
BLAST of EY692657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CIAO1_BOVIN1.668e-1328.96Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_MOUSE2.179e-1327.96Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROGR2.846e-1328.88Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_XENTR1.081e-1228.42Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_ANOGA1.081e-1228.78Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DICDI7.009e-1229.73Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_TRIAD9.154e-1227.96Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_IXOSC5.934e-1129.12Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692657 ID=EY692657; Name=EY692657; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGCCACCACGCAAAAAGCCTAAAAACGTTTATTACTCTCAG
CCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCTCTCTTAAGAAATTTGG
AGCTGAGAACATAAGATAAAAAGGAGCTACGAACTAGTGATCAAGGAGTT
GAAGTTTGAGGGGTAAAATAAAGAAATATAAAGTAAGATGCCTGCACAAA
AAATTGAAACTGGTCATGAAGACACTGTCCATGATGTAGCCATGGATTTC
TATGGAAAACGTTTAGCCACAGCTTCGTCTGACTCCAGCATTAAGATAAT
TGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCTACATTGAAAGGCCATA
GAGGTCCTGTTTGGCAAGTTGCATGGGCACACCCCAAGTTTGGGTCAATC
CTTGCTTCCTGTTCCTATGATGGCCAAGTTATTATCTGGAAGGAAGGTAA
TCAAAATGATTGGACACAGGCTCATACTTTTAATGATCATAAATCATCTG
TCAACTCCATTGCGTGGGCACCTCATGAACTTGGTCTCTCCTTGGCTTGT
GGATCTTCTGATGGGAACATCTCAGTCTTTACTGCTACAGCTGATGGTGG
CTGGGATACTACCAGGATAGACCAGGCCCATCCAGTCGGAGTAACATCTG
TTTCATGGGCCCCGGGCATGGCTCCTGGTGCTTTAGTTGGATTGGGCTTA
CTGGATCCTNGTCAGAAAATGGCTTCTTGTGGTTGTGATATACTGNTAAG
GGTGTGGAGATGTATAATGGGATTTGGAAGATGGGATGCTTCCCTGCCCT
TCANANCACANNTGATGGGTGCNGAGCGTGGCATGGGCACCAAACTGGGT
CTTNCAAATCACAATTGCAGTGCATCACAGATGGGACGTTGTATTTGACC
TGTGCCAGGAAGGGAGCATGGAGGT
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