EY692655

Overview
NameEY692655
Unique NameEY692655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX1_CALJA (Glutathione peroxidase 1 OS=Callithrix jacchus GN=GPX1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12
Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 1 
Query:   16 KSIYEFTVKD-SKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQE-AHEFACTR----YKAEYPIFQKVRVNGPNAEPLYKFLKASK-------------------TGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 489
            +S+Y F+ +  + G+ V L   + K LLI NVAS  G T  +Y+Q+ +   +   +GL +L FPCN    QE   ++E  +     R    ++  + +F+K  VNG  A  L+ FL+ +                    +    + + WNF KFLV  +G  + RYS     + IE DI+  L
Sbjct:   12 QSVYAFSARQLAGGEPVSLGSLRCKGLLIENVASLUGTTVRDYTQMNEPQRRLGPRGLVVLGFPCNHSGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKGEVNGAGAHTLFAFLREALPAPSDDATALMIDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194
The following BLAST results are available for this feature:
BLAST of EY692655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX1_CALJA3.189e-1229.51Glutathione peroxidase 1 OS=Callithrix jacchus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692655 ID=EY692655; Name=EY692655; organism=Citrus sinensis; type=EST; length=786bp
CCACGCGTCCGACAGAAATCAATCTACGAGTTCACTGTCAAGGATAGCAA
GGGCAAGGACGTGGACCTTAGCATTTACAAAGGCAAGGTTCTTTTGATTG
TTAACGTTGCCTCCAAATGTGGTTTTACGGATTCAAATTACTCCCAGTTG
ACTGATCTTTATAACAAATACAAGCATAAAGGTTTGGAGATCTTGGCATT
TCCGTGCAACCAATTTTTGAAGCAAGAGCCTGGGACAAGTCAGGAGGCTC
ACGAATTTGCATGTACTAGATACAAGGCTGAATATCCAATCTTTCAAAAG
GTACGCGTCAATGGTCCAAATGCGGAACCTCTATATAAATTTCTCAAAGC
AAGTAAAACTGGATACTTTGGGTCCAGAATAAAGTGGAACTTCACCAAGT
TTTTAGTTGATACAGAAGGAAATGTCATCGGGCGTTATAGCCCAACCACT
TCTCCGATGGCAATTGAGGGTGACATAAAGAATGCACTGGGAGATGTTTA
GGAGATTTCTGGGTGACTAGTCATTCCTGTGCAAGACATGATATAATAGT
GTATGTACAATGAGTGTTGTAGCTGTTTTGATTGTCCTATATTTTCTGTT
TTATCACTATGTTTTAATTATTTAACTTTTTTTTTTTTGGTTTTATTTAT
TCCGAGAGCAAATATGTGTCTAGAGTATAATGTAATCGATTTATTTCTGT
ATTTCGGTACTCTCAGATTGAAAGACTAGTAGTTTTGTAATATTAATATA
TTATTGTTGTTGGTTTTAAAAAAAAAAAAAAAAAAA
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