EY692641

Overview
NameEY692641
Unique NameEY692641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_PIG (60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_MOUSE (60S ribosomal protein L27 OS=Mus musculus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_MACFA (60S ribosomal protein L27 OS=Macaca fascicularis GN=RPL27 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_HUMAN (60S ribosomal protein L27 OS=Homo sapiens GN=RPL27 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_CHICK (60S ribosomal protein L27 OS=Gallus gallus GN=RPL27 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_CERNI (60S ribosomal protein L27 OS=Cervus nippon GN=RPL27 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_BOVIN (60S ribosomal protein L27 OS=Bos taurus GN=RPL27 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_CANFA (60S ribosomal protein L27 OS=Canis familiaris GN=RPL27 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 2.057e-35
Identity = 74/136 (54.41%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EE++KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.687e-35
Identity = 69/136 (50.74%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KFLK  K  ++++GRYAG+K VIVK   +G++   +GH LVAGI++YP KV +K  AKK AK++++K F+K+VNY HL+PTRYTLDV+  K VVS ++ +   ++  A K   K  EER + GKN+WFF+KL F
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.817e-35
Identity = 69/136 (50.74%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KFLK  K  ++++GRYAG+K VIVK   +G++   +GH LVAGI++YP KV +K  AKK AK++++K F+K+VNY HL+PTRYTLDV+  K VVS ++ +   ++  A K   K  EER + GKN+WFF+KL F
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136          
The following BLAST results are available for this feature:
BLAST of EY692641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RL27_PIG9.234e-3655.1560S ribosomal protein L27 OS=Sus scrofa GN=RPL27 P... [more]
RL27_MOUSE9.234e-3655.1560S ribosomal protein L27 OS=Mus musculus GN=Rpl27... [more]
RL27_MACFA9.234e-3655.1560S ribosomal protein L27 OS=Macaca fascicularis G... [more]
RL27_HUMAN9.234e-3655.1560S ribosomal protein L27 OS=Homo sapiens GN=RPL27... [more]
RL27_CHICK9.234e-3655.1560S ribosomal protein L27 OS=Gallus gallus GN=RPL2... [more]
RL27_CERNI9.234e-3655.1560S ribosomal protein L27 OS=Cervus nippon GN=RPL2... [more]
RL27_BOVIN9.234e-3655.1560S ribosomal protein L27 OS=Bos taurus GN=RPL27 P... [more]
RL27_CANFA2.057e-3554.4160S ribosomal protein L27 OS=Canis familiaris GN=R... [more]
RL27B_YEAST2.687e-3550.7460S ribosomal protein L27-B OS=Saccharomyces cerev... [more]
RL27A_YEAST7.817e-3550.7460S ribosomal protein L27-A OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692641 ID=EY692641; Name=EY692641; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGCAAACACACAAAAACCCATAGAGAGCCGCGGGTGCGCGA
GGAGCGAGAGTTGAAATGGTGAAGTTTCTGAAACCAAACAAGGCCGTGAT
CCTTCTTCAGGGCCGTTACGCCGGTCGGAAGGCGGTGATCGTGAAGTCGT
TCTACGACGGGACCCGCGAGAGGGCGTACGGGCACTGTTTGGTAGCGGGG
ATAAAGAAGTACCCGGGCAAGGTCATCCGCAAGGACTCGGCGAAGAAGAC
AGCGAAGAAGTCACGCGTCAAGGCCTTCGTCAAGTTGGTCAACTACCAGC
ACCTGATGCCCACGCGCTACACTCTCGACGTCGATTTGAAGGACGTCGTG
TCGGCCGATTCCCTCCAGAGCAAGGACAAGAAGGTGACCGCTTGCAAGGA
GACCAACAAGCGCCTCGAGGAGAGGTTTAAGACTGGCAAGAATCGCTGGT
TCTTTACTAAGCTCATGTTTTAGATTTTTAACCAAAGGCAGACAACGACT
TGTGCTTATGCCTTGATTTATGTTGAGTTATTGAAAACGCTTTACTTGTT
AAAGAGCCGATTTTGAGATGTATGTAGTTTCTAGCGAACTTATTGTAGTT
CTCGATCTGGGACTATTATTATGTGATCATATTGGGGTTATGGNGNCAAC
GGAAAATATTGCNACTGAAAAGTGCGTTTANGGACAGATAGAAGAGTACC
AGACGAGTCCTTTTCCCCCAAAGGCGGAGGCAAATTCTTTTACATGGGGT
GGGCGCACATAGATTACCAAGAATTTATATTATGGTTGGATCCCAACAAT
TTCCAAGTAGGCATCAAATTCTCATACCTGTCTCTGGGTAACACGGCTTG
GGGGCTAACCCTGCTTAATATACTTACCCCGTGACATTCCCGCTTTCCCA
GTGGGGAAAAAAAAAAGGCCCCCCGGGGCCCCTCTT
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