EY692641

Overview
NameEY692641
Unique NameEY692641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.194e-32
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+K  K  I+++GRYAG+K VIVK   +GT+   + H +VAGI++ P KV +K  AKK  K+++VK FVKLVNY HLMPTRY+LDV+  K  V++++L+   ++  A K   K  EE+ + GKN+WFF KL F
Sbjct:    1 MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_CAEEL (60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.194e-32
Identity = 65/136 (47.79%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M K +KP K V++L+G+YAGRKAV+VK   +G  +R Y H ++AGI +YP KV +    KK  K++++K F+K+V+Y HL+PTRY++DV   K  ++ ++L++  KK  A  E   + EER+KTGKN+WFFTKL F
Sbjct:    1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.194e-32
Identity = 62/136 (45.59%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVK LKP K  ++ +GR+AG+K VI+++   G++   +GH +VAG+++YP KV +   AK+ A++SRVK F+K+VNY HLMPTRY L++D LK +++AD+ +   ++  A K   K  EE++++GK+ WFFT L F
Sbjct:    1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27B_SCHPO (60S ribosomal protein L27-B OS=Schizosaccharomyces pombe GN=rpl27b PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.526e-30
Identity = 61/136 (44.85%), Postives = 93/136 (68.38%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVK LKP K  ++ +GR+AG+K VI+++   G++   +GH +VAG+++YP KV +   AK+ AK+SRVK F+K++NY HLMPTRY L++D LK +V+  +     ++  A K      EE+++TGK+ WFFT L F
Sbjct:    1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_DICDI (60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.203e-29
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   72 KFLKPNKAVILLQGRYAGRKAVIVKSFYDGT--RERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLD-------VDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            KF+KP + VILL G+YAGRKAV++K+F D T  + R YGHCLVAGI KYP  ++R  S K   K++ +++FVK+VNY H+MPTRY  +         LK+ V+ +S Q   K+        K  E + K GK++WFF+KL F
Sbjct:    4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVA-KRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144          
The following BLAST results are available for this feature:
BLAST of EY692641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RL27_CANAL6.194e-3249.2660S ribosomal protein L27 OS=Candida albicans GN=R... [more]
RL27_CAEEL6.194e-3247.7960S ribosomal protein L27 OS=Caenorhabditis elegan... [more]
RL27A_SCHPO6.194e-3245.5960S ribosomal protein L27-A OS=Schizosaccharomyces... [more]
RL27B_SCHPO1.526e-3044.8560S ribosomal protein L27-B OS=Schizosaccharomyces... [more]
RL27_DICDI2.203e-2946.4860S ribosomal protein L27 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692641 ID=EY692641; Name=EY692641; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGCAAACACACAAAAACCCATAGAGAGCCGCGGGTGCGCGA
GGAGCGAGAGTTGAAATGGTGAAGTTTCTGAAACCAAACAAGGCCGTGAT
CCTTCTTCAGGGCCGTTACGCCGGTCGGAAGGCGGTGATCGTGAAGTCGT
TCTACGACGGGACCCGCGAGAGGGCGTACGGGCACTGTTTGGTAGCGGGG
ATAAAGAAGTACCCGGGCAAGGTCATCCGCAAGGACTCGGCGAAGAAGAC
AGCGAAGAAGTCACGCGTCAAGGCCTTCGTCAAGTTGGTCAACTACCAGC
ACCTGATGCCCACGCGCTACACTCTCGACGTCGATTTGAAGGACGTCGTG
TCGGCCGATTCCCTCCAGAGCAAGGACAAGAAGGTGACCGCTTGCAAGGA
GACCAACAAGCGCCTCGAGGAGAGGTTTAAGACTGGCAAGAATCGCTGGT
TCTTTACTAAGCTCATGTTTTAGATTTTTAACCAAAGGCAGACAACGACT
TGTGCTTATGCCTTGATTTATGTTGAGTTATTGAAAACGCTTTACTTGTT
AAAGAGCCGATTTTGAGATGTATGTAGTTTCTAGCGAACTTATTGTAGTT
CTCGATCTGGGACTATTATTATGTGATCATATTGGGGTTATGGNGNCAAC
GGAAAATATTGCNACTGAAAAGTGCGTTTANGGACAGATAGAAGAGTACC
AGACGAGTCCTTTTCCCCCAAAGGCGGAGGCAAATTCTTTTACATGGGGT
GGGCGCACATAGATTACCAAGAATTTATATTATGGTTGGATCCCAACAAT
TTCCAAGTAGGCATCAAATTCTCATACCTGTCTCTGGGTAACACGGCTTG
GGGGCTAACCCTGCTTAATATACTTACCCCGTGACATTCCCGCTTTCCCA
GTGGGGAAAAAAAAAAGGCCCCCCGGGGCCCCTCTT
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