EY692620

Overview
NameEY692620
Unique NameEY692620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: MPPA_HUMAN (Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.793e-13
Identity = 66/252 (26.19%), Postives = 110/252 (43.65%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTG---------SEVRIIDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPIAEIVARIDSVDASTGQRVATDL 746
            E L +Y+  +YT  RMV+A  G             L     A  +  +  +    A +TG         S V +    IP L    V     S+ + D I   V+  M+G     S GG   G  +  R+ +N +      +N      +Y+DTGL  ++A A P  + ++   I  E   +   V   ++ RA+ QL S L+++++    + ED+GRQ+L T  R++P  E+   I +V     +RVA+ +
Sbjct:  236 EVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLP-HELCTLIRNVKPEDVKRVASKM 484          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI-NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSV 710
            E L  ++  H+T+ RM +   G             L  +           +A   A + G E+R  + D  L   A+    A+  + ++ A  V+Q +LG+   +   G +  S L+Q V   ++    + AFN +Y D+GLFG+Y V++     D+  A   +   +A   +S ADV  A+N+LK+  L+ ++ +     +IG Q L  G  +P   ++ +ID+V
Sbjct:  202 EELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLNIRGGLG-------LAGAKAKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAV 418          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 62/241 (25.73%), Postives = 108/241 (44.81%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVA---NEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINE-IAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLA-YRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSVDASTGQRVATDL 746
            + ++ +   HY    +V+AA+G              F K  A    A+Q +A       +     V +I      A   +   G + TD    A+ V+   LG       GG  M S L Q V     +A S+ ++ + + D GLFGVYA  +P  + D+      E   +A + +++ ++ RA  QL+ S +L ++ T  +   IG+  L +G ++ + +++ARI SV     + VA D+
Sbjct:  202 DRIRRFYRKHYDPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLAPRAGRRTVRAAGRVELIGRKTEQAHVILGMPGLARTDERRWAMGVLNTALG-------GG--MSSRLFQEVREKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDVLKICRDELDHVAEHGLTDDEIGRAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVRAVARDV 433          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 58/226 (25.66%), Postives = 104/226 (46.02%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAE-SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSV 710
            E L  ++  H+T+ RM +   G             L  +           +A   A + G E+R  + D  L   A+    A+  + ++ A  V+Q +LG+   +   G +  S L+Q V         + AFN +Y D+GLFG+Y +++     ++  A   +   +A   +S ADV  A+N+LK+  L+ ++ +     +IG Q L  G  +P + ++ +IDSV
Sbjct:  203 EELHYFVQNHFTSARMALVGLGVSHSVLKQVAEQFLNMRGGLG-------LAGAKAKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSHQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSV 419          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 58/226 (25.66%), Postives = 101/226 (44.69%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG-INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSV 710
            E L  ++  H+T+ RM +   G             L  +     + A        A + G E+R  + D  L   A     A     ++ A  V+Q +LG+   +   G +  S L Q V    +    + AFN +Y D+GLFG+Y +++     D+  A   +   +A   +S  DV  A+N+LK+  L+ ++ +    E++G Q L  G  +P + ++ +IDSV
Sbjct:  203 EELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAK-------ANYRGGEIREQNGD-SLVHAAFVAESAVAGSAEANAFSVLQHVLGA-GPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSV 419          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: QCR2_BOVIN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 57/225 (25.33%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   45 LQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV--GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSV 710
            L +Y+  H+T+ RM +   G             L  +     + A        A + G E+R  + D  L   A+    A+    ++ A  V+Q +LG+   +   G +  S L Q V  G+++  + + AFN +Y D+GLFG Y +++     D+  A   +   +A   +S  DV  A+N+LK+  L+ ++ +    +++G Q L  G   P + ++ +ID+V
Sbjct:  205 LHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAK-------AKYHGGEIREQNGD-SLVHAALVAESAAIGSAEANAFSVLQHVLGA-GPHVKRGSNATSSLYQAVAKGVHQPFD-VSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAV 419          
BLAST of EY692620 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 53/239 (22.18%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   39 EHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPIAEIVARIDSVDASTGQRVATDLFTT 755
            +H   +   HY A    ++ +G             LF+ L     T  +     PA + G     I+ D+      + F G S+ + + +    + A++     +S   +H+  +L        +A ++ ++N+ Y D+G+F +YA    D L+ LA  +  E  ++A +V + ++ RAR Q++S+L +  +  +  +E+IG+    +G+ I   EI+  I ++ A+   + A  +F++
Sbjct:  172 DHFLKFTGKHYNAENFYLSIAGNVDHEEIVKEAERLFSSL-----TQGEKSNFSPAKYIGGH-SFINKDLEQTTLILGFEGTSYINLERLYQTQLLAIIFGGGMSSRLFQHIREKLG-------LAYAVGSYNSPYFDSGVFTIYASTAHDKLELLAAELKNEIKRMAEQVKQEEIERARTQIRSNLQMAQEKVAYKSEEIGKNYAVFGKYISPEEIMEIIMNIKAADIIQTANRIFSS 397          
The following BLAST results are available for this feature:
BLAST of EY692620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
MPPA_HUMAN7.793e-1326.19Mitochondrial-processing peptidase subunit alpha O... [more]
QCR2_RAT1.329e-1226.11Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
Y5738_STRCO1.736e-1225.73Uncharacterized zinc protease SCO5738 OS=Streptomy... [more]
QCR2_MOUSE1.736e-1225.66Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_HUMAN3.867e-1225.66Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_BOVIN1.919e-1125.33Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
Y522_RICBR4.276e-1122.18Uncharacterized zinc protease RBE_0522 OS=Ricketts... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692620 ID=EY692620; Name=EY692620; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGCCCACGCGTCCGAAGACAATCACAAAAGAACATCTGCAG
AACTATATTCACACTCACTATACTGCTCCCAGAATGGTGATTGCTGCTTC
TGGAGCTGTGAAGCATGAAGAAGTTGTTGAGCAAGTGAAGAAATTGTTCA
CAAAATTATCAGCGGATCCAACCACCGCTTCTCAATTAGTTGCAAATGAA
CCAGCAATTTTCACTGGTTCTGAGGTTAGAATAATTGATGACGATATTCC
TTTGGCACAATTTGCGGTTGCTTTCGCTGGAGCATCTTGGACAGATCCAG
ATTCCATTGCCCTGATGGTTATGCAGGCAATGTTGGGTTCATGGAATAAA
AATTCAGTGGGTGGAAAGCACATGGGTTCCGAGCTGGCACAGAGAGTTGG
CATTAATGAAATTGCAGAAAGCATGATGGCCTTCAACACGAACTACAAAG
ACACTGGTCTGTTTGGTGTTTATGCTGTTGCTAAGCCGGATTGCTTAGAT
GATTTGGCCTATGCAATTATGTACGAGACTACCAAGTTAGCTTATCGGGT
TTCAGAAGCTGATGTCACTCGTGCCCGTAATCAGTTGAAATCATCCCTGT
TGCTTCACATTGATGGAACAAGCCCTGTAGCTGAAGATATTGGACGCCAG
CTGCTTACATATGGTCGAAGAATCCCCATTGCTGAAATTGTTGCTAGGAT
AGACTCCGTAGATGCAAGCACTGGTCAGCGCGTTGCAACAGATTTATTTA
CGACAGGGATATCGCAATTGCTGGCATGGGTCCAATTCANGGTTACCCGA
CTACACTGGGTCAGACGCAGAACTACTGGAATAGATACTAAGTATCTCTG
GGTGGTCATACTGCATCCCCGCCTCCTGGGCGGAGTT
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