EY692618

Overview
NameEY692618
Unique NameEY692618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692618 vs. ExPASy Swiss-Prot
Match: PROF2_PHYPO (Profilin-P OS=Physarum polycephalum GN=PROP PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 3 
Query:   81 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 470
            MSWQTYVD+ L   +    L  A I+G DG+ WA S N    K  E  AI   F+ P ++  +G+ + G KYM I+G+  ++                Q ++ G Y+E   PG   ++VE+L DYLI+ G
Sbjct:    1 MSWQTYVDEQL---VGTGQLDGAIIIGLDGNSWA-SKNLT-LKAGEGQAIAALFKTPANVFASGITINGIKYMGIKGDSRSIY-GKKGATGVATVITGQCILIGYYNEKQQPGNAALVVEKLADYLIENG 124
[Close]
BLAST of EY692618 vs. ExPASy Swiss-Prot
Match: PRO1B_ACACA (Profilin-1B OS=Acanthamoeba castellanii PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11
Identity = 41/130 (31.54%), Postives = 65/130 (50.00%), Query Frame = 3 
Query:   81 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 470
            MSWQTYVD +L   +    +T AAI+G DG+ WA S+ F    P +   +   F    ++   G  L G  Y+ ++ +  ++                +A++ G+Y+E + PG    +VE+L DYLI QG
Sbjct:    1 MSWQTYVDTNL---VGTGAVTQAAILGLDGNTWATSAGFA-VTPAQGTTLAGAFNNADAIRAGGFDLAGVHYVTLRADDRSIY-GKKGAAGVITVKTSKAILVGVYNEKIQPGTAANVVEKLADYLIGQG 125
[Close]
BLAST of EY692618 vs. ExPASy Swiss-Prot
Match: PRO1A_ACACA (Profilin-1A OS=Acanthamoeba castellanii PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = 3 
Query:   81 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 470
            MSWQTYVD +L   +    +T AAI+G DG+ WA S+ F    P +   +   F     +  +G  L G  Y+ ++ +  ++                ++++ G+Y+E + PG    +VE+L DYLI QG
Sbjct:    1 MSWQTYVDTNL---VGTGAVTQAAILGLDGNTWATSAGFA-VTPAQGQTLASAFNNADPIRASGFDLAGVHYVTLRADDRSIY-GKKGSAGVITVKTSKSILVGVYNEKIQPGTAANVVEKLADYLIGQG 125
The following BLAST results are available for this feature:
BLAST of EY692618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
PROF2_PHYPO1.844e-1235.38Profilin-P OS=Physarum polycephalum GN=PROP PE=1 S... [more]
PRO1B_ACACA1.561e-1131.54Profilin-1B OS=Acanthamoeba castellanii PE=1 SV=3[more]
PRO1A_ACACA2.039e-1130.77Profilin-1A OS=Acanthamoeba castellanii PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692618 ID=EY692618; Name=EY692618; organism=Citrus sinensis; type=EST; length=784bp
CCACGCGTCCGCGAGGGGAAGGAATAACATAGGAATTAAACAAACAATTG
AATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACGT
TGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCTG
CGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCCT
CAGTTCAAGCCTGAAGAGATTGCTGCAATCATGAAAGATTTTGAAGAGCC
CGGTTCTCTTGCCCCAACTGGTTTGCACCTTGGAGGCACCAAGTACATGG
TAATCCAGGGTGAGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTCTGGT
GGTGTCACCGTCAAGAAAACGGGCCAAGCCCTGATTTTTGGTATATACGA
TGAACCATTGACTCCAGGACAGTGCAACATGATCGTTGAGAGGTTGGGGG
ATTATCTCATTGATCAGGGCCTGTAGATCCCATGTCAACTTCAAATGGTT
TCGATATATTGCTTTCTGGNTTTCGGGCTTTGCCTCTTCTTCCATATTTG
GTCTTGAACTGGCAGTATAAATTTGTTTGCTGCAAAAATACTGTGTGAGG
ACAAGAGTGATTTTTTTTCCCGCCTCTTTTGGNNTCTTANGGGTCCTTTT
TATCTTTTTTTTTTCATCCCCAATTCCTCATGTTCCNTNAATTATGNGNA
TNGCAGTTTTGAGAAATTGAATCTTTGGATACTGTGAACTCTGAAATATG
ATATGGGGACATATTTTTGAAAAAAAAAAAAAAA
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