EY692616

Overview
NameEY692616
Unique NameEY692616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 2
Query:   47 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            SST G ++TCKAAVAWEA KP+ I+DV+VAPPQA EVR+K  +T+LC TD      +     F   LGHEA
Sbjct:    3 SSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEA 73          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   44 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            MS+T G ++TCKAAVAWEA KPL+I+D+EVAPP+A EVRIK   T +C TD   L        F   LGHE
Sbjct:    1 MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHE 71          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 43/84 (51.19%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            ST G ++TCKAAVAWEA KPL+I+D+EV PPQ  EVRIK  YT +C TD   L        F   LGHE       +G G  SV
Sbjct:    2 STEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSV 85          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            +T G ++TCKAAVAWE  KPL I+DVEVAPPQA EVRI+  +T+LC TD   L  +     F   LGHEA
Sbjct:    1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEA 70          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 2
Query:   47 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            SST G ++TCKAAVAWEA +P+ I+DV+VAPPQA EVR+K  +T+LC TD      +     F   LGHEA
Sbjct:    3 SSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEA 73          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   53 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            T G ++ CKAA+AWEAGKPL I++VEVAPP+A EVRI+   TSLC TD   ++S+     F   +GHEA
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEA 71          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            +T G ++TCKAAVA+E  KPL+I+DV+VAPPQA EVRIK  YT+LC TD      +     F   LGHEA
Sbjct:    2 ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEA 71          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   56 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            A  ++ CKAAVAWEAGKPL I+++EVAPPQA EVRIK   T++C TD   L       CF   LGHE    V +  E V +L
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.105e-14
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   44 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNG 280
            MSSTAG ++ CKAAVAW A  PL I+ ++VAPP+A EVR+K  YT++C TD   L+       F   LGHE +     VG G
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEG 82          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            ST G I+ CKAAVAWEAGK L I+++EV PP+A EVR+K ++T +C TD   L        F    GHE       VG G ESV
Sbjct:    2 STEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESV 85          
The following BLAST results are available for this feature:
BLAST of EY692616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADHX_ORYSI4.920e-1556.34Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_DROME4.920e-1556.34Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_DICDI8.393e-1551.19Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_PEA1.096e-1457.14Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ORYSJ1.096e-1454.93Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADH4_HUMAN1.870e-1455.07Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADHX_ARATH4.165e-1455.71Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_RAT5.440e-1451.22Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_CAEEL7.105e-1448.78Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
FADH_PICPA1.212e-1348.81S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692616 ID=EY692616; Name=EY692616; organism=Citrus sinensis; type=EST; length=754bp
CCACGCGTCCGTTTGTGTTCATTCTCATTGGGAATCATCACCAATGTCGA
GCACTGCTGGTCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCA
GGGAAGCCGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCAT
GGAAGTGAGGATCAAGAATCAATACACCTCTCTTTGCCGCACTGATCTNC
TATTTCTGGAGTCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGC
CATGAAGCCAACAGGGGTGTGGGAAATGGTTGGGAAAGTGTTTTCCAACT
TTGAATAAGGGGATCCCCTACTCCCCGGATTACACGGGAGTGGGGGGATG
TAAACACGCACGGCCGAGGAAACCATATGGGGGACCTTTGAGAATAAACC
AGTCCGGGAGGCTTGTTTCTGATGGGAACCTAAGGTTTCACCACAGGGGA
CCTGAAATACCTCCTTGGACAACACCTTTAAGAGGAACATGTGTTAATTA
TGAGGGGGTGGAAAACATACTCTGGACCTTTTGAACAACTCATTTCCTCG
TGCGGCCCCCAAGGGTTAGGGCACTCAGTGGGAAACTCAAAAGGTCCCCA
CCCCGTCTTTGTCCCTCAGAGTGGGGTTAACTCTGCAAAGGCGCATATTG
CTGGACCAAAATTAGTGTTGATAGACTCCAGAGTTGCAACCCAAAGTTTG
ATACTGATTTGCACCCGTGACTGAGACATTCAGAGTATGCAAATACCACG
TGGA
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