EY692616

Overview
NameEY692616
Unique NameEY692616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   56 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIK   T++C TD   L       CF   LGHE    V +  E V +L
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   47 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            S T G ++TCKAAVA+E  KPL+I+DV+VAPPQA EVR+K  +T+LC TD      +     F   LGHEA
Sbjct:    3 SPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEA 73          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   56 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIK   T++C TD   L       CF   LGHE    V +  E V  L
Sbjct:    2 ANKVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   56 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIK   T++C TD   L       CF   LGHE    V +  E V +L
Sbjct:    2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            +TAG ++ CKAAVAWEAGKPL +++VEVAPP+A EVRIK   T +C TD   L        F   LGHE
Sbjct:    1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHE 69          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:   53 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDL-LFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL*IRGSPTPRITREWGD 349
            T G ++TCKAAVAW AG+PL+++DV+V PPQ +EVRI+  +TS+C TDL  +         +   LGHEA   V +  E V ++       P  T E GD
Sbjct:    3 TQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGD 102          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.855e-13
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 2
Query:   53 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESV 292
            TAG ++ CKAAVAWE GKPL I++VEVAPP A EVRIK   T +C TD   L        F   LGHE    V +  E V
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGV 82          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.340e-12
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            +T G  + C+AAVAWEAGKPL +++VEVAPPQA EVRIK   T +C TD   L        F + LGHE
Sbjct:    1 ATVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHE 69          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            ST G ++ CKAA+AWEAGKPL I++VEVAPP+A EVR++    S+CR+D   +    +       LGHE
Sbjct:    2 STKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHE 70          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            STAG ++ CKAA+AWE  KPL I+ +EVAPP+A EVRIK   T +CR+D   +    R P  +  LGHEA
Sbjct:    1 STAGKVIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPLPMV-LGHEA 69          
The following BLAST results are available for this feature:
BLAST of EY692616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADHX_MOUSE1.212e-1350.00Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_MAIZE1.583e-1353.52Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_RABIT2.067e-1350.00Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HUMAN2.067e-1350.00Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHH_GADMO2.067e-1355.07Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHL4_ARATH2.700e-1343.00Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHX_SPAAU7.855e-1351.25Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHL_GADMO1.340e-1253.62Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHQ_RABIT2.286e-1249.28Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH1_NAJNA2.985e-1252.86Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692616 ID=EY692616; Name=EY692616; organism=Citrus sinensis; type=EST; length=754bp
CCACGCGTCCGTTTGTGTTCATTCTCATTGGGAATCATCACCAATGTCGA
GCACTGCTGGTCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCA
GGGAAGCCGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCAT
GGAAGTGAGGATCAAGAATCAATACACCTCTCTTTGCCGCACTGATCTNC
TATTTCTGGAGTCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGC
CATGAAGCCAACAGGGGTGTGGGAAATGGTTGGGAAAGTGTTTTCCAACT
TTGAATAAGGGGATCCCCTACTCCCCGGATTACACGGGAGTGGGGGGATG
TAAACACGCACGGCCGAGGAAACCATATGGGGGACCTTTGAGAATAAACC
AGTCCGGGAGGCTTGTTTCTGATGGGAACCTAAGGTTTCACCACAGGGGA
CCTGAAATACCTCCTTGGACAACACCTTTAAGAGGAACATGTGTTAATTA
TGAGGGGGTGGAAAACATACTCTGGACCTTTTGAACAACTCATTTCCTCG
TGCGGCCCCCAAGGGTTAGGGCACTCAGTGGGAAACTCAAAAGGTCCCCA
CCCCGTCTTTGTCCCTCAGAGTGGGGTTAACTCTGCAAAGGCGCATATTG
CTGGACCAAAATTAGTGTTGATAGACTCCAGAGTTGCAACCCAAAGTTTG
ATACTGATTTGCACCCGTGACTGAGACATTCAGAGTATGCAAATACCACG
TGGA
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