EY692616

Overview
NameEY692616
Unique NameEY692616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 2
Query:   65 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            ++TC AAVAW AG+PL++++VEV+PPQ +E+RIK   TSLCR+DL   ES+   P      GHEA
Sbjct:   13 VITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQSLLP---RIFGHEA 74          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            +T G ++ CKAA+AWEAGKPL ++++EV+PP+  EVR+K   T +CRTD   +    +   F   LGHE
Sbjct:    1 TTEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHE 69          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK     +CRTD   +   +  P   A LGHEA      VG G  +V
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSP-LPAILGHEAAGIVESVGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 38/69 (55.07%), Postives = 42/69 (60.87%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            ST G  +TCKAAVAWEA KPL I+DV VAPP+  EVRIK   T +C TD   L        F   LGHE
Sbjct:    4 STVGKPITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHE 72          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 2
Query:   65 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            ++ CKAAVAWEAGKP+ I++VEVAPP+A EVRIK   T++C TD   L        F   LGHE    V +  E V +L
Sbjct:    5 VIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   56 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            A  ++ CKAAVAWEAGKPL I++VEVAPP+A EVRIK   T++C TD   L        +   LGHE    V +  E V +L
Sbjct:    2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKL 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEA 259
            STAG ++ CKAAV WEA KP  +++VEVAPP+A EVRIK   T +CR+D   +   +  P F   LGHEA
Sbjct:    1 STAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEA 69          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK     +CRTD   +   +  P   A LGHEA      VG G  +V
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP-LPAILGHEAAGIVESVGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 2
Query:   65 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            ++ CKAAVAWEAGKPL I+++EVAPP+A EVR+K   T++C TD   L        F   LGHE
Sbjct:    4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHE 67          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 2
Query:   53 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            T G ++ CKAA+AWEAGKPL I++VEVAPP+A EVR++     LCR+D   +  +         LGHE
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHE 70          
The following BLAST results are available for this feature:
BLAST of EY692616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADHL6_ARATH5.092e-1253.85Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADH4_STRCA5.092e-1246.38Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_PAPHA5.092e-1250.00Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
FADH_CANMA6.650e-1255.07S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADHX_HORSE6.650e-1249.37Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_BOVIN6.650e-1248.78Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADH1_COTJA6.650e-1252.86Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1B_PANTR6.650e-1250.00Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADHX_UROHA8.685e-1253.13Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHP_RABIT8.685e-1248.53Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692616 ID=EY692616; Name=EY692616; organism=Citrus sinensis; type=EST; length=754bp
CCACGCGTCCGTTTGTGTTCATTCTCATTGGGAATCATCACCAATGTCGA
GCACTGCTGGTCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCA
GGGAAGCCGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCAT
GGAAGTGAGGATCAAGAATCAATACACCTCTCTTTGCCGCACTGATCTNC
TATTTCTGGAGTCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGC
CATGAAGCCAACAGGGGTGTGGGAAATGGTTGGGAAAGTGTTTTCCAACT
TTGAATAAGGGGATCCCCTACTCCCCGGATTACACGGGAGTGGGGGGATG
TAAACACGCACGGCCGAGGAAACCATATGGGGGACCTTTGAGAATAAACC
AGTCCGGGAGGCTTGTTTCTGATGGGAACCTAAGGTTTCACCACAGGGGA
CCTGAAATACCTCCTTGGACAACACCTTTAAGAGGAACATGTGTTAATTA
TGAGGGGGTGGAAAACATACTCTGGACCTTTTGAACAACTCATTTCCTCG
TGCGGCCCCCAAGGGTTAGGGCACTCAGTGGGAAACTCAAAAGGTCCCCA
CCCCGTCTTTGTCCCTCAGAGTGGGGTTAACTCTGCAAAGGCGCATATTG
CTGGACCAAAATTAGTGTTGATAGACTCCAGAGTTGCAACCCAAAGTTTG
ATACTGATTTGCACCCGTGACTGAGACATTCAGAGTATGCAAATACCACG
TGGA
back to top