EY692616

Overview
NameEY692616
Unique NameEY692616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK   T +CR+D   +   +  P F   LGHEA      VG G  SV
Sbjct:    2 STAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRIKILATGICRSDDHVITGALVRP-FPIILGHEAAGVVESVGEGVTSV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I+D+EVAPP+A EVRIK   T +CR+D   +   +  P   A LGHE       VG G  SV
Sbjct:    2 STAGKVIKCKAAVLWEPHKPFSIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSRSLASP-LPAVLGHEGAGIVESVGEGVTSV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ C+AAV WE  KP  I++VEVAPP+A EVRIK   T +CR+D   +   +  P   A LGHEA      +G G  +V
Sbjct:    2 STAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITP-LPAILGHEAGGIVESIGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ C+AAV WE  KP  I++VEVAPP+A EVRIK   T +CR+D   +   +  P   A LGHEA      +G G  +V
Sbjct:    2 STAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITP-LPAILGHEAGGIVESIGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL 301
            ST G ++ CKAAV WEA KP  +++VEVAPP+A EVRIK   T +CR+D   +   +  P F   LGHEA   + +  E V  L
Sbjct:    2 STVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSL 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK     +CR+D   +   +  P   A LGHEA     GVG G  +V
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEEVEVAPPKAHEVRIKMVAVGICRSDDHVVSGTLVTP-LPAILGHEAAGIVEGVGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 41/84 (48.81%), Postives = 49/84 (58.33%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK     +CRTD   +   +  P     LGHEA      VG G  +V
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP-LPVILGHEAAGIVESVGEGVTTV 84          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEANRGVGNGWESVFQL*IRGSPTPRITREWGDVNT--HGRGN 373
            STAG ++ CKAAV WE  KP  I ++EVAPP+A EVRIK   + +CR+D   L   ++   F   LGHEA   V +  E V  +       P    + G+ N+  H RGN
Sbjct:    1 STAGKVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALK-VNFPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGN 109          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHEAN---RGVGNGWESV 292
            STAG ++ CKAAV WE  KP  I++VEVAPP+A EVR+K   T +CR+D   +   +  P F   LGHEA      VG G  SV
Sbjct:    1 STAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMP-FPIILGHEAAGVVESVGEGVTSV 83          
BLAST of EY692616 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 2
Query:   50 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKNQYTSLCRTDLLFLESRVRHPCFLAYLGHE 256
            +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIK   T +C TDL  L        F   LGHE
Sbjct:    1 ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHE 69          
The following BLAST results are available for this feature:
BLAST of EY692616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADH1_APTAU8.685e-1250.00Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_PERMA1.481e-1148.81Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_GEOBU1.935e-1146.43Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_GEOAT1.935e-1146.43Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_CHICK1.935e-1146.43Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1G_PAPHA1.935e-1148.81Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH1B_HUMAN1.935e-1148.81Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1B_UROHA2.527e-1140.91Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1_STRCA3.300e-1148.81Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_GADCA3.300e-1149.28Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692616 ID=EY692616; Name=EY692616; organism=Citrus sinensis; type=EST; length=754bp
CCACGCGTCCGTTTGTGTTCATTCTCATTGGGAATCATCACCAATGTCGA
GCACTGCTGGTCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCA
GGGAAGCCGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCAT
GGAAGTGAGGATCAAGAATCAATACACCTCTCTTTGCCGCACTGATCTNC
TATTTCTGGAGTCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGC
CATGAAGCCAACAGGGGTGTGGGAAATGGTTGGGAAAGTGTTTTCCAACT
TTGAATAAGGGGATCCCCTACTCCCCGGATTACACGGGAGTGGGGGGATG
TAAACACGCACGGCCGAGGAAACCATATGGGGGACCTTTGAGAATAAACC
AGTCCGGGAGGCTTGTTTCTGATGGGAACCTAAGGTTTCACCACAGGGGA
CCTGAAATACCTCCTTGGACAACACCTTTAAGAGGAACATGTGTTAATTA
TGAGGGGGTGGAAAACATACTCTGGACCTTTTGAACAACTCATTTCCTCG
TGCGGCCCCCAAGGGTTAGGGCACTCAGTGGGAAACTCAAAAGGTCCCCA
CCCCGTCTTTGTCCCTCAGAGTGGGGTTAACTCTGCAAAGGCGCATATTG
CTGGACCAAAATTAGTGTTGATAGACTCCAGAGTTGCAACCCAAAGTTTG
ATACTGATTTGCACCCGTGACTGAGACATTCAGAGTATGCAAATACCACG
TGGA
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