EY692600

Overview
NameEY692600
Unique NameEY692600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692600 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.710e-11
Identity = 59/177 (33.33%), Postives = 84/177 (47.46%), Query Frame = 2
Query:  290 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRE-----------LLDVKAAKKAILDGFRKTDESLLQESVSGG-----WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG-RLXGRL*SSRAFGDRHLK 766
            FA+YDGHGG   A Y +KR+HA V++  L R            L   K  +KA +D F + D  +   + SG         G+TAV   +    V VAN GD++AV+ R                 + + ++ +HK     E ARI+  GG V   NG R+ G L  SR+ GD++LK
Sbjct:  176 FAVYDGHGGVQVANYCRKRIHA-VLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGK---------------QPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLK 336          
BLAST of EY692600 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = 2
Query:  290 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFR--------KTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLXGRL*SSRAFGDRHLKSLWVCNAD 790
            F I+DGHGG  AAEY + RL        L + L D +  K+  +  ++          D  +L++      + G T +   +  + + VAN+GD++ V+      DG+           AI ++ +HK    +ER RI+++GG +S NG  R+ G L  SR+ GD  LK+L V   D
Sbjct:  124 FGIFDGHGGETAAEYVKSRL-----PEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDK---DGN-----------AIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPD 281          
BLAST of EY692600 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = 2
Query:  290 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFR--------KTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLXGRL*SSRAFGDRHLKSLWVCNAD 790
            F I+DGHGG  AAEY + RL        L + L D +  K+  +  ++          D  +L++      + G T +   +  + + VAN+GD++ V+      DG+           AI ++ +HK    +ER RI+++GG +S NG  R+ G L  SR+ GD  LK+L V   D
Sbjct:  124 FGIFDGHGGETAAEYVKSRL-----PEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDK---DGN-----------AIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPD 281          
BLAST of EY692600 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 52/164 (31.71%), Postives = 77/164 (46.95%), Query Frame = 2
Query:  290 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPRELLDVKAAKKAILDGFRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLXGRL*SSRAFGD 754
            FA+YDGH G   A+Y  + L  ++        SAG P     V+  K  I  GF + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L  SRA GD
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP----SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVYFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGD 199          
The following BLAST results are available for this feature:
BLAST of EY692600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
P2C53_ORYSJ4.710e-1133.33Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
PPM1L_HUMAN8.034e-1130.51Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
PPM1L_BOVIN8.034e-1130.51Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1A_BOVIN8.034e-1131.71Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-D07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692600 ID=EY692600; Name=EY692600; organism=Citrus sinensis; type=EST; length=948bp
CCACGCGTCCGAATGAGTGAAATGCGAGACTCAGGAGCAGCAGCAGAAGC
CGAAACGTGAAGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCC
AAAATCGAAAAAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAAT
TATGCACAAGCAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAG
ATAAGGGCTCTAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGAT
GCCTCCTCTGATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATA
CGACGGACATGGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTAC
ATGCTAATGTTATTTCAGCTGGCTTACCACGTGAGTTGTTGGATGTCAAA
GCTGCCAAAAAAGCCATACTTGATGGTTTTCGGAAAACGGATGAATCTCT
TCTTCAAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTAT
GTATTTGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCA
AAAGCAGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCT
GGATGAATTAAGTTCATTGAAGGCCATTGTGGTGACNAGGGAACACAAAG
CCATCTATCCGCAGGAACGGGCTCGTATTCAGAAATCTGGTGGTACTGTC
AGTTCAAATGGAAGATTACNAGGACGCCTTTGAAGTTCTAGGGCATTTGG
AGATCGCCATTTAAAAAGTTTGTGGGTGTGCAACGCCGACATCATTCCTT
TGAGGTACTGAGAGGATCACTCATCATCTAGGTGTGATGGCTGGGGGGGT
GGTTGGACCTATGACGCANTGATTTGTCAGAATAATTGAGGAGGTTGGCT
GTACGCTGTGACCGCGTCTCGGAGGAAGCAGTCTGACGAGCTGCAAAA
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