EY692575

Overview
NameEY692575
Unique NameEY692575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: ERP44_BOVIN (Endoplasmic reticulum resident protein ERp44 OS=Bos taurus GN=ERP44 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 37/114 (32.46%), Postives = 62/114 (54.39%), Query Frame = 1
Query:  283 VPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLE----DDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEK 612
            V + ++ L  +N D+I L+ +   LV FYA WC   + L P +E+ +     E    + VV A +D D++ D+A++Y +S +PTLK F  G     EY G R ++    +I ++
Sbjct:   27 VTAEIISLDTENIDDI-LNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNANQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQ 139          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query:  292 NVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++V +T  +F++ VL     VLV+++A WCG CK +AP  ++VA  +  +  + V  L+ D+ +D   KYGV G PTL  F  GN +  + G
Sbjct:    4 HIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDY--QGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  295 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 567
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  280 AVPSNVVVLTA-------DNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNK 549
            A P   VV+ A       D F  +VL+ S  VLV+F+APWCG C+ +AP  +++A  +  +D +    L+ D+  ++A +YG+   PT+  F  G K
Sbjct:   24 AAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEY--KDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKK 118          
BLAST of EY692575 vs. ExPASy Swiss-Prot
Match: PDILT_HUMAN (Protein disulfide-isomerase-like protein of the testis OS=Homo sapiens GN=PDILT PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 36/116 (31.03%), Postives = 56/116 (48.28%), Query Frame = 1
Query:  304 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEKCGTSRDGKGQLTS 651
            L   NF+ +V DK KDV V FYAPW   CK L P  E++   +     +++A +D     D+   Y +  +P  + FP G++    Y G   L+ F  F+     T  + + +L S
Sbjct:  392 LVGKNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDVTA-NDIQLMY-LDRYPFFRLFPSGSQQAVLYKGEHTLKGFSDFLESHIKTKIEDEDELLS 505          
The following BLAST results are available for this feature:
BLAST of EY692575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ERP44_BOVIN1.494e-1132.46Endoplasmic reticulum resident protein ERp44 OS=Bo... [more]
THIO_SHIFL7.416e-1137.36Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV... [more]
THIO_SALTY7.416e-1137.36Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE... [more]
THIO_SALTI7.416e-1137.36Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=... [more]
THIO_PSEAE7.416e-1136.96Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3... [more]
THIO_ECOLI7.416e-1137.36Thioredoxin-1 OS=Escherichia coli (strain K12) GN=... [more]
THIO_ECOL67.416e-1137.36Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 ... [more]
THIO_ECO577.416e-1137.36Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA ... [more]
TRXM_CHLRE9.685e-1135.05Thioredoxin M-type, chloroplastic OS=Chlamydomonas... [more]
PDILT_HUMAN9.685e-1131.03Protein disulfide-isomerase-like protein of the te... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-B04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692575 ID=EY692575; Name=EY692575; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGCGCTCCTTGGTGTGGCCACTGTAAAAAGCTTGCTCCAGA
GTATGAGAAACTTGGTGCAAGCTTTAAGAAAGCAAAGTCTGTCTTGATTG
GAAAGGTGGACTGTGACGAGCATAAGAGCTTATGCAGCAAATATGGTGTT
CAAGGATACCCAACAATTCAATGGTTTCCTAAAGGTTCTTTGGAACCCAA
AAAGTATGAAGGGCCACGATCTGCTGAAGCCCTTGCTGAGTATGTGAATA
ATGAAGGAGGAACCAATGTGAAGATAGCTGCAGTCCCATCCAATGTGGTG
GTACTAACAGCTGATAATTTTGATGAGATAGTTTTGGACAAAAGCAAAGA
TGTTTTGGTTGAATTTTATGCACCATGGTGTGGCCATTGCAAAAACCTTG
CGCCTACATATGAAAAGGTGGCAGCCGCATTTACATTGGAAGATGATGTA
GTTGTTGCTAATTTGGATGCTGACAAATACAAGGATCTGGCTGAGAAGTA
TGGAGTTAGTGGATTTCCTACATTGAAGTTCTTTCCAAAAGGCAACAAAG
ATGGTGAGGAATATGGGGGTGGCAGAGATTTGGAAGACTTTGTTTCTTTC
ATCAATGAAAAATGTGGCACCAGTCGTGATGGAAAAGGACAACTTACTTC
AACGGCGGGTATAGTTGCGAGCTTAGATGCCTTGGTGAAGGAATTTGTTG
CTGCTAGCGGTGATGAGAAGAAGCAGTCTTCTCAAGATTGAACGGGGAGT
NGAGGTGCTTTGAGGTTCCACTGCCCAGCATGGGAAGATTTACTTNGAAG
TTGCAANAACTATATGGACAAAAGGAGTGATATGCGAAAAAGGAATTGAT
CGCCTCCGCGTATGCTTGACAGTCATCAGCGCGGCAAAGCGACGA
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