EY692573

Overview
NameEY692573
Unique NameEY692573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.602e-11
Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 1
Query:  517 ALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNT-ETCGMPIVSSLSN-DILIHMSSQNQPSCVPLQSIYQTCGTT 771
            A PVSAIGFEGYEKRLE +F E  VF DP G GLR+LS     +  +     IVS LSN D   ++ S++     PL+ + +TCGTT
Sbjct:    9 ASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYPLKIVIKTCGTT 95          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.602e-11
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  520 LPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSL--SNINWMNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTT 771
            + +SAIGFEGYEKRLE +FFEPG+F D  G GLR+L  S I+ +  +     IVSSLSND L  ++ S++     P + + +TCGTT
Sbjct:    1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEI-LQPAECTIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCGTT 86          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.093e-11
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  520 LPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSL--SNINWMNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTT 771
            + VSAIGFEGYEKRLE SFFEP +F D  G GLR+L  S I+ +        IVSSLSND L  ++ S++     P + I +TCGTT
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEI-LAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTT 86          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNT-ETCGMPIVSSLSN-DILIHMSSQNQPSCVPLQSIYQTCGTT 771
            MA PVSAIGFEGYEKRLE +F E  +FADP G GLR+LS     +  +     IVS LSN D   ++ S++       + + +TCGTT
Sbjct:    1 MAAPVSAIGFEGYEKRLEITFSEASIFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSQKIVIKTCGTT 88          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.662e-11
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  520 LPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSND-ILIHMSSQNQPSCVPLQSIYQTCGTT 771
            + +SAIGFEG+EKRLE SFFEPG+F DP G GLR+LS  +    +    C   IV SL+N+ +  ++ S++       + I +TCGTT
Sbjct:   16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAEC--TIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTT 101          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.952e-11
Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSN---INWMNTETCGMPIVSSLSND-ILIHMSSQNQPSCVPLQSIYQTCGTT 771
            M+  VSAIGFEG+EKRLE SFFEP  FADP G GLR LS      ++    C   IV+SLSN+ +  ++ S++       + I +TCGTT
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAEC--TIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTT 88          
The following BLAST results are available for this feature:
BLAST of EY692573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
DCAM_MAIZE1.602e-1149.43S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM2_ARATH1.602e-1149.43S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_BRAJU2.093e-1151.72S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_HORCH3.570e-1147.73S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM2_DIACA4.662e-1145.45S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_DAUCA7.952e-1147.78S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-B02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692573 ID=EY692573; Name=EY692573; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGACGGAAGGAGATCGAAATTCGTTTTGTGAAACAGAGTG
AAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTC
TCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATA
TTATCTGAGCAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAG
AAGTCTAGCAGTAGTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCAT
TGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCAT
ACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATA
CCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTT
TTAGCCGTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTC
CCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTT
TCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTT
ATGAAAAGAGGCTTGAAAGTTCCTTTTTTGAGCCTGGTGTCTTTGCTGAT
CCTGGAGGTANGGGCCTCCGCTCTCTGTCAAACATCAATTGGATGAATAC
TGAAACCTGCGGAATGCCAATTGTTTCTTCGTTGTCAAATGACATCTTGA
TTCATATGTCCTCTCAGAATCAGCCCTCTTGTGTACCCTTACAAAGTATT
TATCAAACTTGTGGGACTACCAGCTGCTTCTTTCATCCCTGCCATCCTCA
AGTAGCTGAGTCCTCTCGTTGTCTGGTCGATCTGGGAGAACACTCTGGAA
GCTCATATTGCTGGGCTCAGCCTTTCACACGTAGCTCTCTGAGAAGTACT
GTCCTGATGACACTTTGGCAGTTGGNATGGAAGNCAGCTTT
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