EY692501

Overview
NameEY692501
Unique NameEY692501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692501 vs. ExPASy Swiss-Prot
Match: 2AAB_MOUSE (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.733e-63
Identity = 117/191 (61.26%), Postives = 146/191 (76.44%), Query Frame = 2
Query:   74 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMVRRSAASNLGKFAXTVE 646
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG + AH LLPPLE+L TVEET VRDKAVESL +I  +     L   ++PLVKRLA+G+WF +R SACGLF + YP A + +K E+R  +  LC DD PM RR+AAS LG+FA  +E
Sbjct:   19 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPLVKRLASGDWFMSRTSACGLFSVCYPRASNAVKAEIRQHFRSLCSDDTPMERRAAASKLGEFAKVLE 209          

HSP 2 Score: 31.9574 bits (71), Expect = 6.733e-63
Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  652 SFETDIMXIFEDLTQDDQDSXRLLAXE---GVQHLXSXLDL 765
            S +T+I+ +F +L  D+QDS RLLA E    +  L S  DL
Sbjct:  212 SVKTEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252          
BLAST of EY692501 vs. ExPASy Swiss-Prot
Match: 2AAA_CAEEL (Probable serine/threonine-protein phosphatase PP2A regulatory subunit OS=Caenorhabditis elegans GN=paa-1 PE=2 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 6.128e-61
Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 2
Query:   74 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMVRRSAASNLGKFAXTVE 646
            D+ LYPIAVLIDEL+N+D+ LRLNSIR+LSTIA ALG ERTR ELI FL++   D+DEVLL +AE+LG F P VGG +H H LL PLE L TVEET VRDKAVESL +I  +   + L + ++P+++RLA G+WFT+R SACGLF + YP     +K+EL+S++  LC+DD PMVRR+AA+ LG+FA   E
Sbjct:    9 DDALYPIAVLIDELRNEDVTLRLNSIRKLSTIALALGVERTRNELIQFLTDTIYDEDEVLLVLAEQLGNFTPLVGGPDHVHCLLLPLENLATVEETVVRDKAVESLRKIADKHSSASLEEHFVPMLRRLATGDWFTSRTSACGLFSVVYPRVSPAIKSELKSMFRTLCRDDTPMVRRAAAAKLGEFAKVFE 199          

HSP 2 Score: 24.6386 bits (52), Expect = 6.128e-61
Identity = 13/29 (44.83%), Postives = 15/29 (51.72%), Query Frame = 1
Query:  685 DLTQDDQDSXRLLAXEGVQHLXSXLDLXN 771
            DL  D+QDS RLL  E      + LD  N
Sbjct:  213 DLHVDEQDSVRLLTVESAIAFGTLLDKAN 241          
BLAST of EY692501 vs. ExPASy Swiss-Prot
Match: 2AAA_DICDI (Serine/threonine-protein phosphatase 2A regulatory subunit pppA OS=Dictyostelium discoideum GN=pppA PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.507e-56
Identity = 103/188 (54.79%), Postives = 139/188 (73.94%), Query Frame = 2
Query:   86 YPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENN-DDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMVRRSAASNLGKFAXTVE 646
            +PI +LIDELKN+DIQLRLNSI++L +IA+ALG ERTR ELIP+L ++  +D+DEVL+ ++EELG  I +VGG EHA  LLPPL+ L   EE  VR+KAVESLC+I  ++  S   + ++PL+  L+  +WFT+R SACGLF ++YP A   +K  LR  +  LC DD PMV+R+AA+NLG FA  +E
Sbjct:   12 HPIVILIDELKNEDIQLRLNSIKKLQSIAKALGPERTRTELIPYLQDSVLEDEDEVLVVLSEELGNLIEFVGGAEHAVCLLPPLQILAGAEELVVREKAVESLCKIAKEIPTSSFEESFLPLLFSLSKADWFTSRTSACGLFTVSYPRANAEMKKSLRKTFGGLCHDDTPMVKRAAATNLGSFAKQIE 199          

HSP 2 Score: 31.5722 bits (70), Expect = 5.507e-56
Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 1
Query:  652 SFETDIMXIFEDLTQDDQDSXRLLAXEGVQHLXSXL 759
            S +++I+ +F+ L+ D+QDS RLL  E    L S L
Sbjct:  202 SVKSEILPLFQSLSTDEQDSVRLLGVENCALLGSML 237          
BLAST of EY692501 vs. ExPASy Swiss-Prot
Match: 2AAA_SCHPO (Protein phosphatase PP2A regulatory subunit A OS=Schizosaccharomyces pombe GN=paa1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.995e-54
Identity = 106/188 (56.38%), Postives = 137/188 (72.87%), Query Frame = 2
Query:   83 LYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPD-ILKTELRSIYTQLCQDDMPMVRRSAASNLGKFAXTV 643
            LYPIAVLIDELK+D+I  RLN++ RLSTIA ALG ERTR ELIPFL E+ DD+DEVL A+A++LG F+ YVGG E+AHVLL PLE L   EET VRDKAV+SL ++   + +  L  +++PLV+RL+  EWFT+R S+ GL+  AY  + +  +K  LR  ++ LC D+ PMVRR AA+N  KF   V
Sbjct:   10 LYPIAVLIDELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDDEDEVLSALADQLGNFVDYVGGPEYAHVLLSPLENLAATEETVVRDKAVDSLNKVCICLSQEQLEQYFVPLVQRLSTAEWFTSRASSAGLYCAAYSQSENPAVKVSLRQSFSHLCHDEAPMVRRPAATNCAKFVFLV 197          

HSP 2 Score: 26.1794 bits (56), Expect = 4.995e-54
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  664 DIMXIFEDLTQDDQDSXRLLAXE 732
            + + +F  L+ DDQDS RLL+ +
Sbjct:  205 EFIPLFNSLSNDDQDSVRLLSFD 227          
BLAST of EY692501 vs. ExPASy Swiss-Prot
Match: 2AAA_YEAST (Protein phosphatase PP2A regulatory subunit A OS=Saccharomyces cerevisiae GN=TPD3 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.969e-46
Identity = 91/185 (49.19%), Postives = 132/185 (71.35%), Query Frame = 2
Query:   74 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSE-NNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLF-HIAYPSAPDILKTELRSIYTQLCQDDMPMVRRSAASNL 622
            +E LYP+A+L+DELK+DDI  R+ ++++L TIA ALG ERTR ELIPFL+E   DD+DEV   +AE+LG F+PY+GG ++A +LLP LE L + EET VR+KAV+SL  +  ++ +  L   ++PL++ LA  +WF+++VSACGLF  +      D L+  + ++Y QL QDD PMV+R+   NL
Sbjct:   33 NESLYPLALLMDELKHDDIANRVEAMKKLDTIALALGPERTRNELIPFLTEVAQDDEDEVFAVLAEQLGKFVPYIGGPQYATILLPVLEILASAEETLVREKAVDSLNNVAQELSQEQLFSDFVPLIEHLATADWFSSKVSACGLFKSVIVRIKDDSLRKNILALYLQLAQDDTPMVKRAVGKNL 217          

HSP 2 Score: 22.3274 bits (46), Expect = 1.969e-46
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  667 IMXIFEDLTQDDQDSXRLLAXE 732
            I  IF+ +  D+QDS + LA +
Sbjct:  239 ISNIFQKIINDNQDSVKFLAVD 260          
The following BLAST results are available for this feature:
BLAST of EY692501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
2AAB_MOUSE6.733e-6361.26Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_CAEEL6.128e-6159.69Probable serine/threonine-protein phosphatase PP2A... [more]
2AAA_DICDI5.507e-5654.79Serine/threonine-protein phosphatase 2A regulatory... [more]
2AAA_SCHPO4.995e-5456.38Protein phosphatase PP2A regulatory subunit A OS=S... [more]
2AAA_YEAST1.969e-4649.19Protein phosphatase PP2A regulatory subunit A OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-C12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692501 ID=EY692501; Name=EY692501; organism=Citrus sinensis; type=EST; length=870bp
CCACGCGTCCGATTGAGATCGATATTTGATCATAAGGGTTTTCCAAGCGT
TTTGAAACACAATGGCAATGGTTGATGAACCATTATACCCAATAGCCGTT
CTCATAGACGAGCTGAAAAATGATGACATACAGCTTAGGTTGAACTCAAT
ACGTAGGCTGTCAACAATTGCACGCGCTCTTGGGGAGGAGCGGACTCGGA
AGGAATTAATTCCATTTCTGAGCGAAAACAATGACGATGATGATGAGGTA
CTTCTTGCAATGGCAGAAGAGCTTGGTGTTTTCATTCCATATGTGGGAGG
AGTTGAGCATGCCCATGTTTTGCTTCCGCCTCTGGAGACCCTTTGTACTG
TTGAGGAGACCTGCGTGAGGGACAAAGCCGTTGAGTCTTTGTGTAGAATT
GGGTCTCAGATGAGGGAGAGTGATTTGGTTGATTGGTATATTCCTCTGGT
CAAGAGACTAGCGGCTGGTGAATGGTTTACAGCTCGGGTTTCTGCATGTG
GGCTGTTTCACATTGCTTATCCAAGTGCCCCAGATATTTTAAAGACAGAA
TTGCGGTCAATATACACCCAATTGTGTCAAGATGACATGCCCATGGTTAG
GAGGTCTGCTGCATCCAATCTGGGCAAATTTGCTGNCACTGTTGAACCTG
CTCATTTGAGACAGACATCATGTNCATATTTGAGGATCTGACTCAGGATG
ATCAAGATTCTGNTCGATTATTGGCTGNTGAGGGTGTGCAGCACTTGGNA
AGCTGNTTGGACCTCANGAATGTGTAGCACATATTCTCCCTGTTATGGTG
AATTCTCTCAGGTACACTGNATTGAATGATCTTGCGGCATGCTAGTTACT
GATTTGGGGATAGGGGGAAT
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